| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1954 |
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| Symbol | |
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| ID | 8333297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2211847 |
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| End bp | 2212671 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955103 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_003112715 |
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| Protein GI | 256391151 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.292651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTTC CGGCGCTGCC TGATCTCATA GCCTGCGACC TGGACGGGAC CCTGGTCCGC
CACGACGGGA CCGTCTCGCC CCGGACGGTG GCGGCTTTCG CCGCGCTGGA GGCCGCCGGC
CTGCCGTTCG TGTTCGTCAC CGGGCGGCCG CCGCGGCTGA TGGGACAGAT CGCCGACGCC
TTCGGGCTGC ACGGTCTCGC CGTCTGCTCC AACGGCGCCT ACGACTACGA CCTGCGCGCT
CGCGCGGTCG TCGCCGAATA CGCCATCGAC CCCGCCACGG CGGAGAAAGT GGCGCGCGGT
CTGCGCGAAG CCATCCCCGG CATCGGGCTG GCTGTCGAAT ACTCCGACTC CCTCGCCGCC
GATCCCCTGT ACGAGCCTTG GGAATGGGAT CGCGACGTCA CCGTGCGGCG TCTCGACGAA
GCCGACCTGT GGCGGCGTCC GGCGCCGAAG CTGATCGGCC GCCATCCGAG CCTGTCCGCC
GACGACCTGC TCGCCCTGGC CCGGCCGGCG GTCGGGGATC TGGTCACCGT CTACCATTCC
AACGGTCTGC GGCTGGTCGA GGCGGTGGCT CCGGGAGTCA GCAAAGCCGA CGGTCTGGCA
CGGCACGCGG CTCGCCTCGG CGTCAGCGCC GAGGCGGTCA TGGCGTTCGG CGACATGCCC
AACGACCTGT CGATGTTCGA GTGGGCCGGG CTCGCCTTCG CGGTCGGCAA CGCGCATCCG
AGCCTGATCT CTGTCGCCGA CGGCGTGATC GGGTCGGTGC AGGAGGACGG CGTCGCGGTG
TTCTTGGAGG CGTTGCTGGA CAGGCGGCCG GATCGCCAAG CGTGA
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| Protein sequence | MTLPALPDLI ACDLDGTLVR HDGTVSPRTV AAFAALEAAG LPFVFVTGRP PRLMGQIADA
FGLHGLAVCS NGAYDYDLRA RAVVAEYAID PATAEKVARG LREAIPGIGL AVEYSDSLAA
DPLYEPWEWD RDVTVRRLDE ADLWRRPAPK LIGRHPSLSA DDLLALARPA VGDLVTVYHS
NGLRLVEAVA PGVSKADGLA RHAARLGVSA EAVMAFGDMP NDLSMFEWAG LAFAVGNAHP
SLISVADGVI GSVQEDGVAV FLEALLDRRP DRQA
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