| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1946 |
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| Symbol | |
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| ID | 8333289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2201182 |
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| End bp | 2202951 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644955095 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_003112707 |
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| Protein GI | 256391143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.346248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0292973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCA CCACTCCGGA GAAGAAGAGC GCCGCGCGCG CCAAGGCTGG CAGCGCCAGG
AGCGCCAAGA GCGCTAGGGG CGCCACCGCC AAGAACAACA CCGCCGCTCC GCGCAAGCGT
GTCCCCTCCA CGGTCACGTC GGCGGGCCTG TCCCGCGGCA AGATCAAGGA GTGGTCCGCC
CTGAGTCCGT TCGAGCTCAA GGGTGAGCTG ATCGCGCTGG CGGCCGACAC GCACAAGAAG
TCGGCCGCGC AGATGCTCAA CGCCGGGCGC GGGAACCCGA ACTGGATCGC GACCGGGCCG
CGCGAGGCGT ATCTGGCGCT GGGTGCCTTC GCGCTGCAGG AGTCGCGGCG GGTCTGGACC
ATGGACAACC TCGGCGGGAT GCCGGAGGTG GCCGGGAGCG GCGTGCGCTT CGACCGCTTC
TGCCTGGCGA ATCCGGGGAT GACCGGGGTG CGGCTGCTGC GCGACATGGT GGACTACGGC
GTCACCCAGC TGAAGTTCGA CGCCGACGCG TGGATCGGCG AGCTCACCGA CGCCTGGATC
GGCGACCACT ACCCGGACCC GCCGCGGGCG CTCAAGCACT GCCAGAAGGT CGTGCGCGCC
TATCTGGCCG AGGAGATGTA CGGCGGAAAG ACGCCCGGCA AGGTCGACGT CTTCCCGACC
GAGGGCGGCA CGGCGGCGAT GTGCTACCTG TTCGACACGC TGGTCACCAA CGGCATCCTG
CACCCCGGCG ACACCATCGC CCTGATGACG CCGATCTTCA CGCCCTACAT CGAGATCCCC
GAGCTGGAGC GTTACTCCTT CAACGTAATC CAGGTGAAGT CGGACATGAT GACCGAGGAG
GGCGTCCACA TGTGGCGCTA CCCCGACTCC GAGGTCGACC GGCTGGCGGA CCCGAAGGTC
AAGGCCGTGA TGCTGGTGAA CCCCTCGAAC CCGCCGTCGA TGGCGATGTC CGACCGGGTC
CGCGACCGCA TCGCCGACAT CATCCGGACC AAGAACCCGA ACCTGGCGAT CATCACCGAC
GACGTCTACG GCACGTTCGT CCCCGGCTTC CGCTCCCTGG CCGCGACCTG CCCGCGCAAC
ACGGCGCTGG TCTACTCCTG GTCCAAGCAC TACGGCGCGA CCGGCCACCG CCTCGGCGTG
ATCGCGGTGG CCGAGGACAA CGTCTTCGAC CAGATGCTCG CCAAGCTCCC GAAGGCGAAG
AAGGACGAGC TGCGCCGGCG TTACAGCACC CTGACTCTGC ACCCTGAGAA GACGAAGTTC
ATCGACCGCC TGGTCGCCGA CAGCCGCGCG GTCGCGTTGA ACCACACCGC GGGCCTGTCC
ACCCCGCAGC AGACGATGAT GATGCTGTTC TCCCTGTTCG ACCTGCTGCC GGAGGGCCAG
GAGTACAAGG AGCTGCTGCG CACGATCGTC CACCGCCGCC TGGACCTGCT GATGGAGGGC
ATCGGCGTCC ACCACATCAG CGACGACCCG GACCGCGCCT GCTACTACGT CGAGCTGGAC
ATCCTCGCCG AGGCCGAGGC CTTCGAGAGC CGGGAGTTCG CCGACTTCCT GATGGAGACC
TACGAACCCA CCGACGTGGT GTTCCGCCTG GCGCATCAGG CCTCTGTCGT GCTGCTGAAC
GGCGGCGGCT TCGACGGACC GGGATGGTCG GTGCGGGTGT CGCTGGCGAA CCTGGACGAC
TTGGACTACC TGAAGATCGG GCATCACCTG CACGCGATCA TGGAGGAGTA CAAGGAAGAG
TGGCTGAAGA CCAAGACCAA GAAGAAGTGA
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| Protein sequence | MTATTPEKKS AARAKAGSAR SAKSARGATA KNNTAAPRKR VPSTVTSAGL SRGKIKEWSA
LSPFELKGEL IALAADTHKK SAAQMLNAGR GNPNWIATGP REAYLALGAF ALQESRRVWT
MDNLGGMPEV AGSGVRFDRF CLANPGMTGV RLLRDMVDYG VTQLKFDADA WIGELTDAWI
GDHYPDPPRA LKHCQKVVRA YLAEEMYGGK TPGKVDVFPT EGGTAAMCYL FDTLVTNGIL
HPGDTIALMT PIFTPYIEIP ELERYSFNVI QVKSDMMTEE GVHMWRYPDS EVDRLADPKV
KAVMLVNPSN PPSMAMSDRV RDRIADIIRT KNPNLAIITD DVYGTFVPGF RSLAATCPRN
TALVYSWSKH YGATGHRLGV IAVAEDNVFD QMLAKLPKAK KDELRRRYST LTLHPEKTKF
IDRLVADSRA VALNHTAGLS TPQQTMMMLF SLFDLLPEGQ EYKELLRTIV HRRLDLLMEG
IGVHHISDDP DRACYYVELD ILAEAEAFES REFADFLMET YEPTDVVFRL AHQASVVLLN
GGGFDGPGWS VRVSLANLDD LDYLKIGHHL HAIMEEYKEE WLKTKTKKK
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