Gene Caci_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1945 
Symbol 
ID8333288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2200497 
End bp2201096 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content71% 
IMG OID644955094 
Producthypothetical protein 
Protein accessionYP_003112706 
Protein GI256391142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.129603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG AACCCAGCGA CTACGTCAAG CACCTGCCCA TCGGCGAGCA GATCCCCTTC 
GACGCCGACG GCATCCCGGG CTGGGAGATC TTCCCCTTCG AGGGCGATCT GCGGGTGAAG
AAGCTGGAGC CGCCGGTGCT TCCGGAGCCG GCGCGCAACG GTGCGCCGGG CGGCACCCCG
TGCCAGCCGT GCTCCTGGCA GGACTCCGAC TACATCTGGA CCGACGAGCA CTGGCGGCTG
CGGACGTTCC CCGAGGCGTC GATCCCGGCG CTGGTGATGC TGGAGCCGCG CGAGCACTGC
GATCTGGCGG ACCTGCCCGC CGAGCGCGCC GCGGAGTTGG GCGCGCTGTT CCAGCGTGTG
GAGCGCGCGA TCCTCACCCT CGGCGGGATC GCGCGGGTCC ACGTCGCGCG CTACGGCGAC
GGCGGCGACC ACCTGCACTG GTGGTTCTCC GCGCGGCCGG AGGGCATGCT GCAGATGCGC
GGATCATGCC TGCTGATCTG GGAAGACGTA CTGCCGAAGG TCGAGGCCGA ACGCTGGGCC
GCGACGAACC GGACGATCGC CGCGGCGATG GCAGCCGACG GCGGAAGCGC GCATGTCTGA
 
Protein sequence
MATEPSDYVK HLPIGEQIPF DADGIPGWEI FPFEGDLRVK KLEPPVLPEP ARNGAPGGTP 
CQPCSWQDSD YIWTDEHWRL RTFPEASIPA LVMLEPREHC DLADLPAERA AELGALFQRV
ERAILTLGGI ARVHVARYGD GGDHLHWWFS ARPEGMLQMR GSCLLIWEDV LPKVEAERWA
ATNRTIAAAM AADGGSAHV