Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1943 |
Symbol | |
ID | 8333286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2199250 |
End bp | 2200293 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955092 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003112704 |
Protein GI | 256391140 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.102269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAAGA GCGCGGGCAT GCGGGATGTG GCCCTGCTGG CCGGGGTGTC GGTCGGCACG GTCTCGAACG TGCTGAACCG CCCCGACGCG GTGTCCCCGG GCACCCGGGC ACGGGTCCAG GCGGCGATCG CGGAGCTGGG CTTCGTGCGC AGCGAGAGCG CGCGGCTGCT GCGCGCCGGC CGCAGCCAGG TGCTGGCCCT GCTAGCGCTG GACCTGGCCG ACCCGTTCTT CGTCGGCGTG CTGCGCGGCG CCGAGCAGGC CGCCCGCGCC GCCGATCTCG GCGTGCTGGT GATGGACAGC GCCTCCAGCG CCGCCACCGA GGCCACGCAC CTGGTGATGC TGGCCCAGCA ACGGGTTCGG GGCGTGTTGG TGACTCCGGC GGACGCCAGC GGCGCGACGC TGGCGGAGTT CGGCCGCGCG CGGATTCCGT ACGTGTTGGT GGATCGTGAC ATACCGGGCG GAAACGGATG TCGGGTGCTC GTGGACGACG TCGCCGGCGG CGCGATGGCG GTCGCGCACC TGATCGCCGG CGGACACCGG CGCATCGCCT ACGTCGCCGG ACCGCTGGAG CTGCCGCAGT ACCGGGACCG GCTGGAAGGC GCGCGTCAGG CGATCGCCGA AGCCGATCCG GACGTGGAGC TGGTGACGCT GCTCGGCGCG CGCGGGGACG TGGCGGCCGG ACGGGACGCC GCGGCGCGCA TGCTCGGGCT GGGGGAGCGC CCGACCGGGG TGTTCTGCGG CAACGACCTG ATCGCCTTGG GGATGCTGCA AGGGCTGTTC GCCGCCAGTG TGGCGGTACC GCAGGACGTG GCGATCGTTG GCTACGACGA CCTGGAGGTC GCGGCGGCGG CGGTCGTGCC ACTGTCGTCG ATACGGCGCC CCGCCTCGCG CGTGGGCAAG GAGGCCGCGG AGCTTCTGGT CGAGGAGAGC GGGGCGGCGG CGGGGCAGCA TGTGCACCGC GAGCTGGTTT TTCAGCCGGA GCTGGTGGTG CGGGCTTCTA GCTTGGGGGC GGCGGCTTCG ACGGCTCGAA ACCCGGACAG CTGA
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Protein sequence | MTKSAGMRDV ALLAGVSVGT VSNVLNRPDA VSPGTRARVQ AAIAELGFVR SESARLLRAG RSQVLALLAL DLADPFFVGV LRGAEQAARA ADLGVLVMDS ASSAATEATH LVMLAQQRVR GVLVTPADAS GATLAEFGRA RIPYVLVDRD IPGGNGCRVL VDDVAGGAMA VAHLIAGGHR RIAYVAGPLE LPQYRDRLEG ARQAIAEADP DVELVTLLGA RGDVAAGRDA AARMLGLGER PTGVFCGNDL IALGMLQGLF AASVAVPQDV AIVGYDDLEV AAAAVVPLSS IRRPASRVGK EAAELLVEES GAAAGQHVHR ELVFQPELVV RASSLGAAAS TARNPDS
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