Gene Caci_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1933 
Symbol 
ID8333276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2188543 
End bp2188965 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content70% 
IMG OID644955082 
Productguanine-specific ribonuclease N1 and T1 
Protein accessionYP_003112694 
Protein GI256391130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCC TGCGCCGATT CGGCCTGTCC TGGACCCAGC GGCTCGCCGT GGGCTTCGCC 
GCCACCGCGT CCGCCGTCAC CGTCACCGTC GTCGCCAGTC CCGCCGCCGA CGCGACCGTG
TACGGCTCGT GCACCGTCAG CGGCTGCTCG GCGGCGGCCT CGGCGAACTC GACGTGGGAG
TCGATGAACT ACCCGAGCTC GCGCGGCTGG TACGACTGGC CGAACGGCAA GTGCAACTAC
GCCGGCGGCA CCTACTACAA CGACGACGGC CAGCTGCCCT CCGGCGACAG CTTCCAGGAG
TTCGACGTCA ACCCGCGCGC GTGCGGCGCG CACCGCGACG CGGTCCGGAT CGTCGTGGAC
ATGAACACCG GGCAGGTCTG GTACTCCCCG GACCACTACA GCGACTTCTA CGCGCTGTCG
TAA
 
Protein sequence
MSSLRRFGLS WTQRLAVGFA ATASAVTVTV VASPAADATV YGSCTVSGCS AAASANSTWE 
SMNYPSSRGW YDWPNGKCNY AGGTYYNDDG QLPSGDSFQE FDVNPRACGA HRDAVRIVVD
MNTGQVWYSP DHYSDFYALS