Gene Caci_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1902 
Symbol 
ID8333245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2157513 
End bp2158376 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content71% 
IMG OID644955051 
Producthypothetical protein 
Protein accessionYP_003112663 
Protein GI256391099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0204265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC GAACCGCGGC GATGTTCGCC GCCGCGGCCG TGACCCTCGC GGCCGCTCTC 
ACCCTGACCG CCGGATCCGC GAGCGCGCAC CCCGCGCCGG CCGCGGACAC CGCGGCCCGT
CCGAACGTCA GCGTCACCCT GGCGAGCACC ATCGCCCTGA ACGACTGCTC GGCCTCGCTC
GTGCGCTACC CCACCTCGCT CAGCAGCGAC CGCGCCCTGA TGCTCACCGC CGGGCACTGC
TTCGAGGGCG GGATGCCCTC GGCCGGGGAG GTCCTGCAGA ACGTGGCCAG CAGCCGCTCC
GGCACGCTGC TGAACTCCTC CGGCCGGCGC CTGGCCACCG TGCGCGCGGA CAAGCTGCTG
TACGCGACGA TGACCGACAC GGACATCTCA GTGTACGAAC TCACCACCAC GTTCGCCGCG
CTGAGCAGCC AGTACGGCGC GACGCCGCTG ACCATATCGG CGAGCCACCC GGCGGCCAAC
ACCTCCATCG CCATCCCGTC GGCCTACTGG GACCGGACCT GGCGCTGCAC CCTGAACGGC
TTCGCCGGCA CGGTGGAGGA GGACCAGTGG ACCTGGCACG ACTCGCTGCG CTACGGCGCG
ACCGGGTGCG CCGTCATCGG CGGCAGCTCC GGCTCGCCTG ACGTGGATAC CGCCACCGGC
CAGGTCGTCG GCGTGAACAA CACGATCAAC GAGGACGGCC AGATGTGCAC GCTGGACAAC
CCGTGCGAGG TCGGCTCCGA CGGCACCACG ACCGAGCACA AGGGGCAGGG GTACGGGCAG
GAGACGTACT GGCTCACAAC GTGCCTGACC GCGTCGAACG CGATCAACCT GTCGACCCCC
GGCTGCCTGC TGCCGAAGCC GTAG
 
Protein sequence
MLKRTAAMFA AAAVTLAAAL TLTAGSASAH PAPAADTAAR PNVSVTLAST IALNDCSASL 
VRYPTSLSSD RALMLTAGHC FEGGMPSAGE VLQNVASSRS GTLLNSSGRR LATVRADKLL
YATMTDTDIS VYELTTTFAA LSSQYGATPL TISASHPAAN TSIAIPSAYW DRTWRCTLNG
FAGTVEEDQW TWHDSLRYGA TGCAVIGGSS GSPDVDTATG QVVGVNNTIN EDGQMCTLDN
PCEVGSDGTT TEHKGQGYGQ ETYWLTTCLT ASNAINLSTP GCLLPKP