Gene Caci_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1895 
Symbol 
ID8333238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2150542 
End bp2151573 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID644955044 
ProductABC transporter related 
Protein accessionYP_003112656 
Protein GI256391092 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGCG AGGCGGTGAG AACACGGCAC TACGCGGCGC CGCCGCCGAC GGAGATCGTT 
GAGGACATGG AGCCATCCAC ACGGGAAACC ATCATCGAGG CACGGGCGGT GAGCTTCGCC
TATCGGGCGA AGTCCGGACC GGCGAAGAAG CCTCACGTCG CCGTCCGGGA CGTCGATCTG
CGCATCCGGC GCGGCGAACT CTATGCGCTG CTGGGTACGA ACGGCGCGGG CAAGACCACG
ACGCTCGAAG TGCTCGAAGG CCACCGCGCG GCGACGTCCG GCCAGGTCAC AGTCCTGGGA
GGCGCTCCGT CCGACCGGCG GCACATCCGG CCGCGCATGG GCATCATGCT CCAGGACTCC
GGACTCGCCG CCGAGCTCAG CGTGCGCGAG AGCGTGGCGC TGGCCGGAGC GATCTCGGGA
CGCCGTGACG ACGTCGGGAA GGTGCTGGAA CGCGTGGGCA TCAGCCATCG CGGCGGCACG
CGCGTCGCGC AGCTCTCCGG CGGGGAGAAG CGGCGCGTCG ACTTCGCGAT GGCGATCTGG
GGCGGTCCGG AACTGGTCTT CCTCGACGAG CCGACGACCG GTCTGGACCC CGCGTCGCGC
GAGGCGCTGT GGTCGGTCGT CGAAGACCTG AAGGCCGACG GCGCCACCTT CGTCCTGACG
ACCCACTACC TGGAGGAGGC TGAGAAGCAC GCCGATCGCG TGGGGCTGAT GCACGCCGGC
TCGATCCGGC GCGAGGGCAC GGTCGCGGAG CTGACCGAGG GCGGCGTCAG CACGATCCGT
TTCGTGCCGC CCGGCGCCGT CAGCGACATC CCGATCCCGT TGGCGAGGAC GGAGAACGGC
TTGGCGGTGA TCGAGACCCG GCAAGTGCAG CAAGACGTGA CCGCACTGAT GACCTGGGCA
GCCGAGCACG ATCACCGGCT GGCGCGATTC ACCGTCCGCG AATCAGGACT CGACGACATC
TTCCGCTCGC TACGGCACGA GGCACCGGAA GCGGCAGACC CGTCATCAAG CTACGAGAGG
ACGAACGCGT GA
 
Protein sequence
MSCEAVRTRH YAAPPPTEIV EDMEPSTRET IIEARAVSFA YRAKSGPAKK PHVAVRDVDL 
RIRRGELYAL LGTNGAGKTT TLEVLEGHRA ATSGQVTVLG GAPSDRRHIR PRMGIMLQDS
GLAAELSVRE SVALAGAISG RRDDVGKVLE RVGISHRGGT RVAQLSGGEK RRVDFAMAIW
GGPELVFLDE PTTGLDPASR EALWSVVEDL KADGATFVLT THYLEEAEKH ADRVGLMHAG
SIRREGTVAE LTEGGVSTIR FVPPGAVSDI PIPLARTENG LAVIETRQVQ QDVTALMTWA
AEHDHRLARF TVRESGLDDI FRSLRHEAPE AADPSSSYER TNA