Gene Caci_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1886 
Symbol 
ID8333229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2138870 
End bp2139271 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content71% 
IMG OID644955035 
Producthypothetical protein 
Protein accessionYP_003112647 
Protein GI256391083 
COG category[S] Function unknown 
COG ID[COG3462] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCC GACCTTTCTA CGGTCCCGGA CGCCATGTTC ACGAGGGCCT CGGTTGGGGT 
GGCTGGGTGC TGTGGGTGTT GTTCATGGTC GCGCTGTGGG CGTTGGTCAT CATGGCGGTC
GTGTGGTTGG TGCGCAGCTT CACGCATCGC GGACCGGTGA CGGCCCAGCG CGGTATGAGA
CTCCCCGGCG GCCCGCCGGC GTGGAGCTCG GGCGGGACGG GGACGGTCCC GGCCGAGCAG
ATCCTGGCAG AGCGGTTCGC CCACGGGCAG ATCGACGAGA ACGAGTACCG ATCCCGGCTC
GACGTGTTGC GCGGGAACCG TCCGGCGGCG CAGACCGCAC CGCCGGCGCC GCCCCAGCCG
TCGCAGCCGC CCGAGCCGCC CGAACCACCG GGTGAGGGCT AG
 
Protein sequence
MYPRPFYGPG RHVHEGLGWG GWVLWVLFMV ALWALVIMAV VWLVRSFTHR GPVTAQRGMR 
LPGGPPAWSS GGTGTVPAEQ ILAERFAHGQ IDENEYRSRL DVLRGNRPAA QTAPPAPPQP
SQPPEPPEPP GEG