Gene Caci_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1885 
Symbol 
ID8333228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2137624 
End bp2138820 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content71% 
IMG OID644955034 
ProductSte24 endopeptidase 
Protein accessionYP_003112646 
Protein GI256391082 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTACG CCGCCCAGGA CTTCACCCCC GAGCAGATCG AGCGTGCGCG CGCCTATAAG 
CGCAGCGTCC GGCCTCTGCG CATCATCTCG ACCATTCTCG GTCTGGCCGT CCCCCTGGTC
CTCGGCCTCA CTCCGGCCGG CGCGGGGCTG GTCAGAGTGG CCGGTGACGT CGCCGGCGGC
GGTTGGGTCG CCCGCGCGCT GCTCGGCAGC GTCGCGCTGT CGCTGCTCGG GCTGGTGCTC
CGCCTGCCGC TGAGCATGTG GAGCGAGACC GTCAGCCGTC GCTGGGGTCT GTCGAAGCGC
GGTTGGGGAC TGTTCGCTGC CGACACCGCC AAGGGATTCC TCATCGGCGT CGTGCTCACC
GCGGCGGCGA TCGGTGCTCT CTATGCGCTC ATGCGCCACG CCGGAGACGC GTGGTGGGTG
TGGGCCGCGC TGGCCGCCGC GCTGCTGGCG CTGCTGGGCT CGTTCATCAT GCCGGTGCTG
ATCGAGCCGC TGTTCAACAA GTTCAAGCCG CTGCCCGACG GTCCGCTGCG CGAGCGGCTG
ATGGCGCTGG TCGAGCAGTC CGGCGTGCCG GTCAAGGACA TCCTCGTCAG CGACAGCTCC
CGGCGCACCA CCGCCGCCAA CGCCTACGTC TCCGGCCTCG GCAAGACCCG CCGCCTGGTC
GTGTGGGACA CCACCACCGA CAGCCTGGAC ACCGGCGAGG TCGCCGCGAT CGCCGCCCAC
GAACTCGGCC ACGCCGCCCG GCGCGACGTG CTGACCGGCA CCGTCTTCGG CGCGGTCGGC
GCGGCGCTGG GCGTCGCGGT CCTGGCGGCG GCGCTGCACT GGTCGCCGCT GCTCGACGCC
GCCGGGGTGG ACCACGCCGA GGACCCGCGC TCGCAAGCAC TGGTCCGCGC CGTACTGGTG
CTGATCGGCC TGATCGGCGA GCCCTGGGGA CTGGCATACA GCCGCTATAT CGAAGGACGC
GCAGACGGGT ACGCCCTCGA CCTGTTCCGC GACCCCGACA CCATCGTGCG CATGGAACGC
GCGCTCGCCG TCCAGAACAT CGCAGACCTG GAACCTCGCC GCTGGGAAGT CCTGCTGCGC
TACACCCACC CGCCGATCCC GGCACGCATC GCGCACGCGC GCGGCTGGGC GGCGCAAACA
GGGGTCGCAA TTCCTAAGCC GCTTTCAGCG CCGTCTAAGG ATCCGGGCGC ACCTTAG
 
Protein sequence
MDYAAQDFTP EQIERARAYK RSVRPLRIIS TILGLAVPLV LGLTPAGAGL VRVAGDVAGG 
GWVARALLGS VALSLLGLVL RLPLSMWSET VSRRWGLSKR GWGLFAADTA KGFLIGVVLT
AAAIGALYAL MRHAGDAWWV WAALAAALLA LLGSFIMPVL IEPLFNKFKP LPDGPLRERL
MALVEQSGVP VKDILVSDSS RRTTAANAYV SGLGKTRRLV VWDTTTDSLD TGEVAAIAAH
ELGHAARRDV LTGTVFGAVG AALGVAVLAA ALHWSPLLDA AGVDHAEDPR SQALVRAVLV
LIGLIGEPWG LAYSRYIEGR ADGYALDLFR DPDTIVRMER ALAVQNIADL EPRRWEVLLR
YTHPPIPARI AHARGWAAQT GVAIPKPLSA PSKDPGAP