Gene Caci_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1877 
Symbol 
ID8333220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2128556 
End bp2130397 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content70% 
IMG OID644955026 
ProductHydantoinase B/oxoprolinase 
Protein accessionYP_003112638 
Protein GI256391074 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAACC CGGTGCTGCT GGAGATCGTC GAGGGCACGT TGGCCTCCGT CGAACGCGAG 
GTCGAGACCG CGATCGCCCG GACCTCGCGC TCCCCGATGA TCCGCGACGC CCACGACTTC
CGCGTCGGCA TCCACGACGC CCGGCTGCGC AAGCTCACCG GCCGGTCGTA CTCCGCGCTG
GTGCATCCGG TGGTCCGCGA CTACCCGGTG GACCAGATGC GGCCCGGCGA CGTCTTCTTC
CACAACGACG TCTACCTCTC CGAAGGCGGC ATCGGACACC TTCCCGACCT GTGCGTCACC
GTGCCGGTCT TCCACGACGG CGCGGTGGCC GCCTTCGTCC AGGCCTTCGG ACACCACGAC
GACATCGGCG GCGCGTGCCC CGGATCGATG CCCTCCGGCG CGCGCAGCGT CTTCGAAGAA
GGCTTGATGG TCCCGCCGAT CCGGCTGTGG GACGCCGGCG TGCCGAACGA GGCGGCGCTG
AAGATCATGA CGCGCAACTC CCGGATGCCG GACTCGCTGG CCGCAGACCT GGACGCGGAG
TGCTCGGCGT GCCTGATGGG AGCGCGGCGC CTCGGGGAGG TCTTCGCGCG CTACGGCCGC
GAGGCCGTTG AGGAGTGCTT CGACGCCATC ATCGACCTGA CCACCGAGAC CTTCCGCCGC
GAGATCCTGG CGAAGATCCC CGAGGGCTCC TACACCTGGG AGGACTACGC CGAGCACGAC
GGCGTCGACC CGCCGAAGCT GCACCGCCAG CGCATCACGC TGACCAAGCT CGCCGAGGAC
GGCGGCCGGC TGATCATCGA CTTCGACGGC ACCGGACCGC AGGCGAAGGG ACCGATCAAC
CACTGCGGCG ACTACGCGGA CGGCAACTTC CTGAAGAAGT GGCTCGCCCC GGTGCTGCGC
AACCTCGCCG ACAGCCCGGA GCGGATGGCC GAGCTCGACG TGAACGAGGG CGTCGTCCCG
CTGATCGAGA TGCGCTTCCC GCCGCCTGGA ACGCTGCTCA CACCGGTGTT CCCGGCGCCG
ACGAACGCCC GCACCTTCGT GATCCTGCGG CTGCTCGGCG TGCTGTCCGG GGCGCTGGCC
AAAGCCGTGG ACGGCCGCAT GCCCGCCGAC CAGGAGACCA TCCGCTACAC CGGCGTCTAC
GGCACCGACG CCGACGGGCT GCCGTACCTG ATGCGCGAAG TCCTCGGCGG CGGCTCCGGC
GGGCGCTATT ACGCCGACGG CGAGGACACG ATCCACGTCG TGCCGGACTC GCGGAACATC
CCCGTGGAGT TCGCCGAGGC GCGCTGGCCG TTCCGCGTGG AGAAACTGGG ATTGGCGGTG
GACTCCGGCG GAGCGGGGCG CTTCCGCGGC GGACTCGGCT ATGAGAAGCA GATCAGGATG
CTGCGAGACG CCGATTTCAT GAGCATCGCC GACCGCTCGA TCCTGGGCTG CTGGGGCGTG
AAGGGCGGCC GGGCGGGCCG GCCGTTCGAG GTGGTGATCG ATCCGGGCGG TCCCGCGGAG
CGGAAGGTCG ACGCGCTGGC GGACGCCGAA CCGGTGTACG CCGGGGAGAT CATCCGGATC
CGGACGACCG GCGGCGGCGG GTGGGGCGAC CCGTTCGAGC GGCCGATGGC GGACATCATC
ACTGATGTGC GGTGGGGCAA GGTCTCGATC GAGGGCGCGC GGCGGGACTA CGGCGTGGTG
CTGACGCCGG TCGGTACCGG CTATGAGGTC GATGCCGCGG CGACCGGGAC ACTGCGCGAG
GAGATGTGGA TGTTCCGTGG CCACGAGGCG TTCTTCGACC GGGGTCCGGG CTTCGCGGCG
ATGGCGCACG GAGCGACATC AGCCTATTGC GATTGGCAGT GA
 
Protein sequence
MLNPVLLEIV EGTLASVERE VETAIARTSR SPMIRDAHDF RVGIHDARLR KLTGRSYSAL 
VHPVVRDYPV DQMRPGDVFF HNDVYLSEGG IGHLPDLCVT VPVFHDGAVA AFVQAFGHHD
DIGGACPGSM PSGARSVFEE GLMVPPIRLW DAGVPNEAAL KIMTRNSRMP DSLAADLDAE
CSACLMGARR LGEVFARYGR EAVEECFDAI IDLTTETFRR EILAKIPEGS YTWEDYAEHD
GVDPPKLHRQ RITLTKLAED GGRLIIDFDG TGPQAKGPIN HCGDYADGNF LKKWLAPVLR
NLADSPERMA ELDVNEGVVP LIEMRFPPPG TLLTPVFPAP TNARTFVILR LLGVLSGALA
KAVDGRMPAD QETIRYTGVY GTDADGLPYL MREVLGGGSG GRYYADGEDT IHVVPDSRNI
PVEFAEARWP FRVEKLGLAV DSGGAGRFRG GLGYEKQIRM LRDADFMSIA DRSILGCWGV
KGGRAGRPFE VVIDPGGPAE RKVDALADAE PVYAGEIIRI RTTGGGGWGD PFERPMADII
TDVRWGKVSI EGARRDYGVV LTPVGTGYEV DAAATGTLRE EMWMFRGHEA FFDRGPGFAA
MAHGATSAYC DWQ