Gene Caci_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1862 
Symbol 
ID8333205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2108890 
End bp2109459 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content70% 
IMG OID644955011 
Producthypothetical protein 
Protein accessionYP_003112623 
Protein GI256391059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCC TGGACACGCT GCTCGGTCGG ACCAAGCCGG TCAAGCCGGA CCTCGACCAG 
CTCTTCGGCC TGCCGTCGGC GGCCCTGACC CTGCAGGCGG CGACCCACTT CCGTCCCACG
GGTCTGGGCT CGGTGTGCTT CAAGCGCGCC GAGGGCCGGG CCTTCGACGA CGTCGAGTCG
GACATCACCA CGCTCCTGGC GGCCGGCAAC GGTCCGAAGG TCGAGGCGCG CGACGACTCC
TACGGCTACA CCTGGCTGGT CTCGCACCAC GAGCCGGACG ACACCGCCGG GCTGGTGACC
GACCTGCACG CGGTGAACAG CTCGCTGCAG GACACCGGCT TCGGCCCGCA GCTGCTGTGC
TCCCTGGTCT CCTTCACCGA CGACCGGGAC CGCCGCCTGG CGCTGGTGTA CCTGTACAAG
CGCGGCACGT TCTACCCCTT CGCCCCGCAG TCCGGCGAAC AGCGCGACGG CGCGTTGGAA
CTCCAGATCA AGGCCCTGCT GGGGAACGAC CTGCGTCTGG AGCAGGACCT GAGCCGCTGG
TTCCCGGTGT GGGGCGCGCC CGGTCTGTGA
 
Protein sequence
MGFLDTLLGR TKPVKPDLDQ LFGLPSAALT LQAATHFRPT GLGSVCFKRA EGRAFDDVES 
DITTLLAAGN GPKVEARDDS YGYTWLVSHH EPDDTAGLVT DLHAVNSSLQ DTGFGPQLLC
SLVSFTDDRD RRLALVYLYK RGTFYPFAPQ SGEQRDGALE LQIKALLGND LRLEQDLSRW
FPVWGAPGL