Gene Caci_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1861 
Symbol 
ID8333204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2107743 
End bp2108621 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID644955010 
Productpeptidase M48 Ste24p 
Protein accessionYP_003112622 
Protein GI256391058 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGT TCCTGCTCGG TCTGGTCTAC GTCGCCGCGA TCGGCGTGGC CGTGGCCCTC 
GCCCCGAAGG GCCTGCTGGC GATCCTGATC ATCGTCATCG GGGGATTCTT CTTCGCGCAG
TGGTTCCTGT CGGACAAGAT CACGCTGTTC TCGATGAACG CCAAGATCGT CCAGCCCGAG
GACAACGAGT ACGCGCGCCG TCTGCACGGG GTGCTGGACC GGCTGTGCGC GCTGGCCGAC
ATGCCCAAGC CGCGGGTCGG CCTGGTCGAC ACCGAGGCGC CCAACGCCTT CGCCGCCGGC
CGCAGCCAGA AGAACACCGT GATCTGCGCG ACCACCGGGC TGATGCGCAA GCTCCCGGAC
GACCGCCAGC TGGAGGCGGT GCTCGCCCAC GAGCTCTCGC ACGTGGCGCA CAAGGACGTC
GTGGTGATGA CCATCGCCTC GTTCCTGGGC ATCCTGTCCG GTCTGATCAC CCGCATCACC
TTCGAGATGG GGCTGTGGGG CGGCTTCTCC GACCGCGGCC GCGACGACGA TGAGAGCCCG
GCCGCCGTGC TGTTCTTCGT GATGATCGTC TCCGGCCTGA CCTACCTGCT GTCCTTCCTG
CTGATCCGTG GCCTGTCCCG GTATCGCGAG CTGGCCGCGG ACCGGTCCGG CGCGCTGCTG
ACCGGCAACC CCTCGGCGAT GATCGCCGCG CTGACCGAGA TCACCGGCGA CCTGGGCCGG
ATCCCGACCC AGGACCTGCG CAAGCAGCAG GCGTTCAACG CGTTCTTCTT CGCCCCGGCG
ATCAAGGGCG CGTCCGTGTC GAACCTGTTC GCCACGCACC CGACGCTGCA GGTCCGCCAG
GAGAAGCTGG CTCAGCTGGC CGTCGAGATC GGCCGCTGA
 
Protein sequence
MVMFLLGLVY VAAIGVAVAL APKGLLAILI IVIGGFFFAQ WFLSDKITLF SMNAKIVQPE 
DNEYARRLHG VLDRLCALAD MPKPRVGLVD TEAPNAFAAG RSQKNTVICA TTGLMRKLPD
DRQLEAVLAH ELSHVAHKDV VVMTIASFLG ILSGLITRIT FEMGLWGGFS DRGRDDDESP
AAVLFFVMIV SGLTYLLSFL LIRGLSRYRE LAADRSGALL TGNPSAMIAA LTEITGDLGR
IPTQDLRKQQ AFNAFFFAPA IKGASVSNLF ATHPTLQVRQ EKLAQLAVEI GR