Gene Caci_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1855 
Symbol 
ID8333198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2103102 
End bp2103614 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content70% 
IMG OID644955004 
Producthypothetical protein 
Protein accessionYP_003112616 
Protein GI256391052 
COG category[S] Function unknown 
COG ID[COG3787] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCT CCGTGGGTTT CGAAGGCACT GAGCAACCCT CTTCCGTCAT CGCCTCCAGC 
ATCGAGGCGA TCGCCGCCGG GACCATGGTC CTGTCGCTGG CCACCGCCGA TGCCGCGGGT
ACTCCGCACG CGAACATGGC GTTCTTCGCG GTGGGGAGTG AATTCGACCT CTTCTTCGTC
AGCGAGCCGA GTACGCAACA CGGGCAGAAC TCCTCTGAGC GGGCCGAGGC CGCGGCGGCG
ATCTGGCTGC CGCCGCCGGA GTTCGGCGAG GGCTTGCGCG GGATGCAGCT GAGCGGGGAG
TGCGGGGCGG TCGTCGGGGC GGAGGGGGAG GCGGCGTTCG AGGCGTATCG GGAGCGGTTC
CCGTCGTTCG GGGGCGACCC GGCGGTGCGT GCCGCTTATC TGGAGGGGAC GGGAGCGGCG
AGTCTGTACC GGCTGCGGGT GGCGCGGCTG CGGCTGGTCG ACGAGCCGCA CCTCGGACGG
CGGAACTATC TGGAGCTCAG CGTCCTGAGG TAA
 
Protein sequence
MALSVGFEGT EQPSSVIASS IEAIAAGTMV LSLATADAAG TPHANMAFFA VGSEFDLFFV 
SEPSTQHGQN SSERAEAAAA IWLPPPEFGE GLRGMQLSGE CGAVVGAEGE AAFEAYRERF
PSFGGDPAVR AAYLEGTGAA SLYRLRVARL RLVDEPHLGR RNYLELSVLR