Gene Caci_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1852 
Symbol 
ID8333195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2098258 
End bp2098983 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content72% 
IMG OID644955001 
Productintegral membrane protein 
Protein accessionYP_003112613 
Protein GI256391049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.093294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGA GCATGAGCAT TTCCAACCTG GACGACGTCT GGCACCGAGT GACCGGCACG 
CAGCCCGATC CACCGCGCAA CTTGATCATC GCGCTGGGCG CGGCGGCGTT GGTGGCGGTG
TTGTGGCGGC CGGTGTGGCG GATAGCGCGC AACGCCGTGA CGATCGCGCA CGAGGGCGGG
CACGCCGTCG TGGCGCTGCT GTGCGGCCGC CGGCTGTCCG GGGTGCGGCT GCACCACGAC
ACCTCCGGCG TCACGGTCTC CTATGGCAAG CCGCGCGGAC TGGGCATGGT CCTCACCGTC
GCGGCCGGCT ACACGGCGCC GAGCCTGATC GGCCTCGGCG GGGCGTGGCT GCTGGCGGCG
CAGCACATCA CGATGCTGCT GTGGGCGAGC GTGCTGCTGC TGGCGCTGTT GCTGCTGGAG
ATCCGCAACG TCTACGGCGT GCTGACGGTG GTGCTCACCG GCGGGGCGGT GGTCGCCGCG
TCGTGGACCA CGAACACGAA CGTGCAGGCC GGGTTCGCCT ACCTGATGGT CTGGTTCCTG
CTGCTCGCCG GGGTGAAGCC GGTGCTGGAG CTGAGCCGGA CGCGCTCGCG CACCGGCGCC
CGCGACTCCG ACGCCGACCA GCTGCACCGG CTGACCGGGT TTCCGGCGGG CGGCTGGCTG
TTCGTGTTCG GGCTGGTGGC GGTGGGGTGC GCGGTGGCTG GAGGACGCTG GCTGCTGCAC
CTGTGA
 
Protein sequence
MAVSMSISNL DDVWHRVTGT QPDPPRNLII ALGAAALVAV LWRPVWRIAR NAVTIAHEGG 
HAVVALLCGR RLSGVRLHHD TSGVTVSYGK PRGLGMVLTV AAGYTAPSLI GLGGAWLLAA
QHITMLLWAS VLLLALLLLE IRNVYGVLTV VLTGGAVVAA SWTTNTNVQA GFAYLMVWFL
LLAGVKPVLE LSRTRSRTGA RDSDADQLHR LTGFPAGGWL FVFGLVAVGC AVAGGRWLLH
L