Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1852 |
Symbol | |
ID | 8333195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2098258 |
End bp | 2098983 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955001 |
Product | integral membrane protein |
Protein accession | YP_003112613 |
Protein GI | 256391049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.093294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGTGA GCATGAGCAT TTCCAACCTG GACGACGTCT GGCACCGAGT GACCGGCACG CAGCCCGATC CACCGCGCAA CTTGATCATC GCGCTGGGCG CGGCGGCGTT GGTGGCGGTG TTGTGGCGGC CGGTGTGGCG GATAGCGCGC AACGCCGTGA CGATCGCGCA CGAGGGCGGG CACGCCGTCG TGGCGCTGCT GTGCGGCCGC CGGCTGTCCG GGGTGCGGCT GCACCACGAC ACCTCCGGCG TCACGGTCTC CTATGGCAAG CCGCGCGGAC TGGGCATGGT CCTCACCGTC GCGGCCGGCT ACACGGCGCC GAGCCTGATC GGCCTCGGCG GGGCGTGGCT GCTGGCGGCG CAGCACATCA CGATGCTGCT GTGGGCGAGC GTGCTGCTGC TGGCGCTGTT GCTGCTGGAG ATCCGCAACG TCTACGGCGT GCTGACGGTG GTGCTCACCG GCGGGGCGGT GGTCGCCGCG TCGTGGACCA CGAACACGAA CGTGCAGGCC GGGTTCGCCT ACCTGATGGT CTGGTTCCTG CTGCTCGCCG GGGTGAAGCC GGTGCTGGAG CTGAGCCGGA CGCGCTCGCG CACCGGCGCC CGCGACTCCG ACGCCGACCA GCTGCACCGG CTGACCGGGT TTCCGGCGGG CGGCTGGCTG TTCGTGTTCG GGCTGGTGGC GGTGGGGTGC GCGGTGGCTG GAGGACGCTG GCTGCTGCAC CTGTGA
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Protein sequence | MAVSMSISNL DDVWHRVTGT QPDPPRNLII ALGAAALVAV LWRPVWRIAR NAVTIAHEGG HAVVALLCGR RLSGVRLHHD TSGVTVSYGK PRGLGMVLTV AAGYTAPSLI GLGGAWLLAA QHITMLLWAS VLLLALLLLE IRNVYGVLTV VLTGGAVVAA SWTTNTNVQA GFAYLMVWFL LLAGVKPVLE LSRTRSRTGA RDSDADQLHR LTGFPAGGWL FVFGLVAVGC AVAGGRWLLH L
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