Gene Caci_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1847 
Symbol 
ID8333190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2092632 
End bp2093483 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID644954996 
Producttransposase IS4 family protein 
Protein accessionYP_003112608 
Protein GI256391044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCAG TCCCATCATC TCTGTTCGAT GTGTTGTGGG ACCAGTTCGC AGCTCTGCTG 
CCCGAACGGC CCGAGTTCGA CCCGGCCCAT CCGTGGGGAT GCCACCGCCG CCGGATACCG
GACCTGGTCG TGTTCCGGCA CGTCGTGGAC GCCCTGGTCC ACGGTTCGGG GTACGAGCGG
ATCGCCTCGC AAGGGTGCTC CGCGACCACC ATCCGCCGCC GCGTCAAGCA ATGGGCCCAC
ATAGGCCTGG CACAGGAACT CCACCGGATT GTGCTGGCCG CCTACGACAC GATGATCGGC
CTGGACCTCC ACGACCTGTC CGCCGACGGC TGCCACACCA AAGCCCCATG CAAAGGCGAC
AAGGCCGGAC CCTCACCGGT CGACCGCGCC AAGCAGGGCT TGAAACGCTC CACCTTGGTC
GACGGCGACG GCGTTCCGCT CGGCCTGGCC TCGGCCGGCG CCAACCGACA CGACTCAAAG
CTGCTGGAAC CCACCATCGA GGCAGCGAAA CAGCAGGTCG GACACCTACC GGACAGAGCC
ACGATCCACC TGGACTCCGC CTACAACGGC AAACCGTGCC GCAAGGTCCT CGACGACCAC
CACCTGATCG GCGAGATAGC CGCCAAGGGG GTGCCGGCTC CGATCCAGGT CGGCAAGCGA
TGGGTCGTGG AACGCAGCCA GAGCTGGATG AACGGCTACG GCAAGATCCG CCGCTGTTTC
GAACGCGACG GCGAGATCGT CGACTTCTAC CTCTACCTCG CCGCCGCGTT CGTCACCGTC
CGTGCACTCA TCCGCCGAGC CCGCAAGCGC TACCGCTGGG ACACCCGACC GACCAGCCGC
CGACTCCCCT AA
 
Protein sequence
MPAVPSSLFD VLWDQFAALL PERPEFDPAH PWGCHRRRIP DLVVFRHVVD ALVHGSGYER 
IASQGCSATT IRRRVKQWAH IGLAQELHRI VLAAYDTMIG LDLHDLSADG CHTKAPCKGD
KAGPSPVDRA KQGLKRSTLV DGDGVPLGLA SAGANRHDSK LLEPTIEAAK QQVGHLPDRA
TIHLDSAYNG KPCRKVLDDH HLIGEIAAKG VPAPIQVGKR WVVERSQSWM NGYGKIRRCF
ERDGEIVDFY LYLAAAFVTV RALIRRARKR YRWDTRPTSR RLP