| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1843 |
|---|
| Symbol | |
|---|
| ID | 8333186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2089331 |
|---|
| End bp | 2089819 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644954993 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003112605 |
|---|
| Protein GI | 256391041 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCG CCACCTCCGC GCTGTTGCGG CGCACCGGCT CCGACGGACG TCCCGAAGTG
CTGGTCGGGC TGAAGAAGAC CGGCTTCGGC GCCGGGCTCG TCAACTGCCC CGGCGGCAAG
CTCGAGCCCG GGGAGAGTCC GGAGGAGGCG GTCGTGCGCG AGTTCATGGA GGAGACCGGC
ATGACGCTGG CGGCGGGCGA CCTGACGCCG GCTGCCGAGC TGGTCTTCCG GTTTCCGGAC
GTGCCGGAGT GGGAGGACCT GCGCCTGCAC TACTTCACCG CGACGAGGTT CGCCGGGGAG
CCGCAGGAGA GTGAGGAGTT CGCCGCGGGG TGGTTGGCCG AGGCGGAGCT GCCCTATGAG
CGGATGTGGG ACGATTCACG GCTGTGGCTG CCACCGGTGC TGGCCGGCGA GCACGTCGTG
ATGGACGTCA CCTACGCCGG CCGCAGCAAA GTGGCCTCGT ACACCCGTCA GCCGTCGCCG
GCCGGGTGA
|
|---|
| Protein sequence | MLIATSALLR RTGSDGRPEV LVGLKKTGFG AGLVNCPGGK LEPGESPEEA VVREFMEETG
MTLAAGDLTP AAELVFRFPD VPEWEDLRLH YFTATRFAGE PQESEEFAAG WLAEAELPYE
RMWDDSRLWL PPVLAGEHVV MDVTYAGRSK VASYTRQPSP AG
|
|---|
| |