Gene Caci_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1833 
Symbol 
ID8333176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2079158 
End bp2079886 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID644954983 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionYP_003112595 
Protein GI256391031 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACGAGGGCAC CGACTCCCCC GCGCATCCGG CCCACGACCC GCACGAAGGG 
CTCGGGGCGC GGCTGAACTG GCTGCGCGCC GGCGTGCTGG GCGCCAACGA CGGCATCGTC
TCCACCGCCG GCCTGGTCGT CGGCGTCGCC GGCGCCACCG ACACCAAGTC CACGCTGCTG
GCCTCCGGCA TCGCCGGACT GCTGGCCGGC TCGCTGTCGA TGGCCTCCGG GGAGTACGTG
TCGGTGTCCA CGCAGCGCGA CACCGAGATC GCGGCTCTGG CGCTGGAACG CAAGGAGCTG
GCCGAGGCAC CGGAGGAAGA GCTCGAGGAA CTGGTCGGCC TCTACCGCGA CAAGGGCCTG
ACGGAGAACA CCGCGCGCCG CGTCTCCGAG GAGCTGACTG CGCACGACGC CCTCAGCGCC
CACGCGCAGA CCGAACTCGG TATTAACCCC GACTCCCTGG CGAACCCCTG GAGCGCGGCG
ATCGCCAGCT TCGTGGCGTT CAGTGTCGGC GCGCTGCTGC CGCTGCTGGC GATCGTGCTG
CCGCCGCGCG AGTGGCGCGT CCCGGTGACC GTGGTCAGCG TGCTGATCGC GCTCGTCGCG
ACCGGCTTCA TCAGCGCGCG CCTGGGCCGC GCGGCGCCGG GACGGGCGAT TCTGCGCAAC
GTGATCGGCG GCGCGCTGGC GATGGGGATC ACCTATCTCG TCGGCACCCT GATCGGGAAA
GTGGATTAG
 
Protein sequence
MSADEGTDSP AHPAHDPHEG LGARLNWLRA GVLGANDGIV STAGLVVGVA GATDTKSTLL 
ASGIAGLLAG SLSMASGEYV SVSTQRDTEI AALALERKEL AEAPEEELEE LVGLYRDKGL
TENTARRVSE ELTAHDALSA HAQTELGINP DSLANPWSAA IASFVAFSVG ALLPLLAIVL
PPREWRVPVT VVSVLIALVA TGFISARLGR AAPGRAILRN VIGGALAMGI TYLVGTLIGK
VD