Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1833 |
Symbol | |
ID | 8333176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2079158 |
End bp | 2079886 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954983 |
Product | protein of unknown function DUF125 transmembrane |
Protein accession | YP_003112595 |
Protein GI | 256391031 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ACGAGGGCAC CGACTCCCCC GCGCATCCGG CCCACGACCC GCACGAAGGG CTCGGGGCGC GGCTGAACTG GCTGCGCGCC GGCGTGCTGG GCGCCAACGA CGGCATCGTC TCCACCGCCG GCCTGGTCGT CGGCGTCGCC GGCGCCACCG ACACCAAGTC CACGCTGCTG GCCTCCGGCA TCGCCGGACT GCTGGCCGGC TCGCTGTCGA TGGCCTCCGG GGAGTACGTG TCGGTGTCCA CGCAGCGCGA CACCGAGATC GCGGCTCTGG CGCTGGAACG CAAGGAGCTG GCCGAGGCAC CGGAGGAAGA GCTCGAGGAA CTGGTCGGCC TCTACCGCGA CAAGGGCCTG ACGGAGAACA CCGCGCGCCG CGTCTCCGAG GAGCTGACTG CGCACGACGC CCTCAGCGCC CACGCGCAGA CCGAACTCGG TATTAACCCC GACTCCCTGG CGAACCCCTG GAGCGCGGCG ATCGCCAGCT TCGTGGCGTT CAGTGTCGGC GCGCTGCTGC CGCTGCTGGC GATCGTGCTG CCGCCGCGCG AGTGGCGCGT CCCGGTGACC GTGGTCAGCG TGCTGATCGC GCTCGTCGCG ACCGGCTTCA TCAGCGCGCG CCTGGGCCGC GCGGCGCCGG GACGGGCGAT TCTGCGCAAC GTGATCGGCG GCGCGCTGGC GATGGGGATC ACCTATCTCG TCGGCACCCT GATCGGGAAA GTGGATTAG
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Protein sequence | MSADEGTDSP AHPAHDPHEG LGARLNWLRA GVLGANDGIV STAGLVVGVA GATDTKSTLL ASGIAGLLAG SLSMASGEYV SVSTQRDTEI AALALERKEL AEAPEEELEE LVGLYRDKGL TENTARRVSE ELTAHDALSA HAQTELGINP DSLANPWSAA IASFVAFSVG ALLPLLAIVL PPREWRVPVT VVSVLIALVA TGFISARLGR AAPGRAILRN VIGGALAMGI TYLVGTLIGK VD
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