| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1829 |
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| Symbol | |
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| ID | 8333172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2074531 |
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| End bp | 2076534 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644954979 |
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| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_003112591 |
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| Protein GI | 256391027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTCT CAGTAGTTCT GCCCGCGATG GGTGAGTCGG TCACCGAGGC CACCATCACC
CGCTGGCTGA AGAAGGAAGG CGACCGGGTC GAGGTCGACG AGCCGCTGCT CGAGGTCTCC
ACCGACAAGG TCGACACCGA GATCCCGTCC CCGGCGGCCG GGTTCCTGGT GTCGATCAAG
GTCGGCGAGG ACGAGACGGT CGAGGTCGGC GCGGAGCTGG CGGTCATCGG CGACACCGCG
GACGCGGCCG GCGGCGGGAA CGGCGGCGGC GCGCCGCAGG CCGCCCCGGC GCAGGCCGAG
GCTCCGGCGC CGCAGCAGCA GGCGGCGCCC GCGCCCCAGG CCGCCCCGGC TCCGCAGCCG
CAGGCTCAGC AGCAGCCGGC TCCGCAGGCT CAGGCTCCGG CGCAGGAGCA GGCGCAGGCG
CCGTCCGGCG GCGGCTCGGC CTCCGGCACC CCGATCACGC TGCCGGCGAT GGGCGAGTCG
GTCACCGAGG CGACCGTCAC CCGCTGGCTG AAGGCCGTCG GCGACACCGT CGAGGTCGAC
GAGCCGCTGC TCGAGGTCTC CACGGACAAG GTCGACACCG AGGTCCCCTC GCCGGTCGCC
GGCGTGCTGC TGGAGATCAG CGTCGCCGAG GACGAGACGA TCGACATCGG CGCGCAGCTC
GCGGTGATCG GCGCCCCGGG CTCGTCGGCT CCGGCGCAGC AGCAGGCTCC GGCCGCTCCG
GCGCAGCCGC AGCAGCAGGC GGCGCCCGCG CCCCAGGCCG CCCCGGCCCC GCAGGCCCAG
CCGCAGCAGC AGGCCGCCCC GGCTCCGCAG CCGCAGGCCC AGCAGCCGGC GTCGCTGCCC
AGCACCCCGC CGGTCGCGCC GTCCGCCCCG GCTCCGCAGG CTCCGGCCCC GGCCGTGGCC
AACGCGCCGT CCTACACCGC GACCGCCCCG GCGCCGAACG GCCAGGCTCA GCAGTCCGCC
CCGGCTGCCG GCGGCGAGTT CCGTCCGGGC ACCCCGGCGG TCGTCGCGCA GGCCCAGACC
GCCGCCCGCG TCGACGCCCC CGGCGCCGGC AGCGAGCCGG CCGCGGCCTA CGTCACCCCG
CTGGTCCGCA AGCTGGCCGC CGAGCACAGC GTGGACCTGG CGAGCGTCAC CGGCACCGGG
GTCGGCGGCC GGATCCGCAA GCAGGACGTG ATCGACGCGG CCAAGGCGGC CCAGGCCAGC
GCGGCCGCCG CCGCTCCGGC TCCGGCCGCG GCGTCCACCG GCTCCGCGCC GGCCGCCAAG
GCGCCGGTCA CCCCGAGCCC GCTGCGCGGC CGCACCGAGA AGCTGACCCG GATGCGCGCG
CTGATCGCCA AGCGCATGCT CGAGTCGCTG CAGACCTCGG CGCAGCTGAC CACGGTGGTC
GAGGTGGACG TCACCAACGT CGCCCGCCTG CGGACCCGCG CCAAGAACGA GTTCGAGGCG
CGCGAGGGCG TGAAGCTCTC GTTCATGCCG TTCTTCGCCC TGGCCGCGAT CGAGGCGCTC
AAGCAGCACC CGAACCTGAA CGCGGTCATC GACACCGAGG CCGGCACGGT CACCTACCAC
GACTACGAGA ACCTGGCGAT CGCGGTCGAC AGCGAGAAGG GCCTGATGAC CCCGGTCATC
AAGAACGCCG GCGACCTGAA CCTGGCGGGC CTGGCCCGCG GGATCGCGGA CCTGGCCGAG
CGGACCCGCA CCAACAAGGT CCTGCCCGAC GAGCTGGCCG GCGGCACGTT CACGCTGACC
AACACCGGCA GCCGCGGCGC GCTGTTCGAC ACCCCGATCC TGAACCAACC GCAGGTCGGC
ATCCTCGGGA CCGGCGCGGT CGTGAAGCGT CCGGCGGTCA TCAACGACCC CGACCTCGGC
GAGGTCATCG CGGTCCGCTC GATGGTCTAC CTGGCCCTGA CGTACGACCA CCGCCTGGTG
GACGGCGCGG ACGCCGCCCG CTTCCTGGTC ACGATCAAGG AGCGGCTGGA AGAGGGCAAG
TTCGACTCGG ACCTCGGTCT GTAG
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| Protein sequence | MSVSVVLPAM GESVTEATIT RWLKKEGDRV EVDEPLLEVS TDKVDTEIPS PAAGFLVSIK
VGEDETVEVG AELAVIGDTA DAAGGGNGGG APQAAPAQAE APAPQQQAAP APQAAPAPQP
QAQQQPAPQA QAPAQEQAQA PSGGGSASGT PITLPAMGES VTEATVTRWL KAVGDTVEVD
EPLLEVSTDK VDTEVPSPVA GVLLEISVAE DETIDIGAQL AVIGAPGSSA PAQQQAPAAP
AQPQQQAAPA PQAAPAPQAQ PQQQAAPAPQ PQAQQPASLP STPPVAPSAP APQAPAPAVA
NAPSYTATAP APNGQAQQSA PAAGGEFRPG TPAVVAQAQT AARVDAPGAG SEPAAAYVTP
LVRKLAAEHS VDLASVTGTG VGGRIRKQDV IDAAKAAQAS AAAAAPAPAA ASTGSAPAAK
APVTPSPLRG RTEKLTRMRA LIAKRMLESL QTSAQLTTVV EVDVTNVARL RTRAKNEFEA
REGVKLSFMP FFALAAIEAL KQHPNLNAVI DTEAGTVTYH DYENLAIAVD SEKGLMTPVI
KNAGDLNLAG LARGIADLAE RTRTNKVLPD ELAGGTFTLT NTGSRGALFD TPILNQPQVG
ILGTGAVVKR PAVINDPDLG EVIAVRSMVY LALTYDHRLV DGADAARFLV TIKERLEEGK
FDSDLGL
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