Gene Caci_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1818 
Symbol 
ID8333161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2064295 
End bp2065332 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID644954968 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003112580 
Protein GI256391016 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.702991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGGCA GAGGACGTCC GAGCCGAGCG ACCGTGTACG AGCGTCTCGA TCGGGCATTG 
ACGGAGCTCA ATGACCGATT CGGCGGGCTG CCGAGTCCGA AGGAGGCCCA GTCGATCTGG
GACGACATCT GGCATCTGGA AGCACACCAC TCCACGGCGC TGGAGGGGAA CACGCTCGTC
CTTCGCGAGG TGCAGACGCT TTTGGAACAG GGCCGGGCTG TCGGAGCCAA GCCGCTCAGG
GAGTACAACG AGGTGCGCGG TTACGCTGAT GCCGCGCAGT GGGTCTACGG CCAAGCTTTG
GAACCGGGGG ATTGGCACGA CGGCCGACTT CTCACGCTTG CCGAAGTCCG CCAGGTGCAT
CACGCAGCCA TGACCCCCGT ATGGGATGTG GCGCCGCACC CGGATGCGAA GAGCAGCGAA
GGACCGGGAA GCTTTCGCGA GCACGACATC CATCCATTCT CGGCGGGCAT GATCCCGCCT
GCGTGGCCGC TTGTGCCTGA GAGAATGCAG GGGTGGGTCT CGGAGGTGTG CCTCGCCGGT
GAACGGCTCG CAGTCGCGGC GCCGGATCAA CCGCTCCCGG AAGTGTTGGC GCGCTTGCAC
AACGAGTTCG AGCGGGTGCA TCCGTTCATC GATGGGAATG GCCGAACAGG GCGGCTGGTC
CTGAACCTCG TGCTTGTCAG GCTTGGGTAC CCTCCGGTTG TCATCTTCAA GCGACAACGC
GAGGCATACC TGTCGGCGAT GCAACGCGCC GACACCGGCG ACTACGGTTC GCTGGGAGAG
CTGATCGCCC GAGCGATGAT CGACAGCCTC AACAGCTTTA TTGTGCCGAA CGTCGCCGGC
CCGGCTCGCT TGGTACCGCT CGCGGCTTTG GTTGACAGAA CGACAACCCT GGCCGCCTTA
CGGCAGGCGG CCCAGCGAGG TCGGCTCGAC GCTGTGCAGG GGTCCGACGG CGTATGGAGA
AGTTCGCGCA AAGCGGTCGA CGCCTACAAG GCGTCCAAAC ATCAGCGACG CCCGACAAAT
ACCGCGGCTT CCGAATAA
 
Protein sequence
MVGRGRPSRA TVYERLDRAL TELNDRFGGL PSPKEAQSIW DDIWHLEAHH STALEGNTLV 
LREVQTLLEQ GRAVGAKPLR EYNEVRGYAD AAQWVYGQAL EPGDWHDGRL LTLAEVRQVH
HAAMTPVWDV APHPDAKSSE GPGSFREHDI HPFSAGMIPP AWPLVPERMQ GWVSEVCLAG
ERLAVAAPDQ PLPEVLARLH NEFERVHPFI DGNGRTGRLV LNLVLVRLGY PPVVIFKRQR
EAYLSAMQRA DTGDYGSLGE LIARAMIDSL NSFIVPNVAG PARLVPLAAL VDRTTTLAAL
RQAAQRGRLD AVQGSDGVWR SSRKAVDAYK ASKHQRRPTN TAASE