Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1815 |
Symbol | |
ID | 8333158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2060483 |
End bp | 2060938 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954965 |
Product | ATP-cone domain protein |
Protein accession | YP_003112577 |
Protein GI | 256391013 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0440431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACTGTC CCTTCTGCAA GCATGACGAC AGCCGGGTCG TGGACTCCCG CAGCTCCGAG GACGGCACCT CGATCCGCCG CCGCCGTCAG TGCCCCGAGT GCGGGCGCCG CTTCACCACG GTGGAGAGCG CCCAACTCCT GGTGGTGAAG CGCTCCGGGG CGACCGAGCC GTTCAGCCGC GACAAAGTCG TCGGCGGCGT GCGCAAGGCG TGTCAGGGCC GACCGGTGAC CGAGGGCCAG TTGGCCGTGC TCGCCCAGCG GGTGGAGGAC GTGCTGCGGG CCGCAGGGTC GGCGGAGATC GCCGCCCACG AGGTCGGGCT GGCGATACTC GTCCCGCTCC GGGAGCTCGA CGAGGTCGCC TACCTGCGCT TCGCTTCGGT GTACCGGGCC TTTGAGTCCT TGGAGGACTT CGAGGCCGAG ATTTTGATGT TGCGCGCGGA GCGCGAACGG GCCTGA
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Protein sequence | MHCPFCKHDD SRVVDSRSSE DGTSIRRRRQ CPECGRRFTT VESAQLLVVK RSGATEPFSR DKVVGGVRKA CQGRPVTEGQ LAVLAQRVED VLRAAGSAEI AAHEVGLAIL VPLRELDEVA YLRFASVYRA FESLEDFEAE ILMLRAERER A
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