Gene Caci_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1815 
Symbol 
ID8333158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2060483 
End bp2060938 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID644954965 
ProductATP-cone domain protein 
Protein accessionYP_003112577 
Protein GI256391013 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0440431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTGTC CCTTCTGCAA GCATGACGAC AGCCGGGTCG TGGACTCCCG CAGCTCCGAG 
GACGGCACCT CGATCCGCCG CCGCCGTCAG TGCCCCGAGT GCGGGCGCCG CTTCACCACG
GTGGAGAGCG CCCAACTCCT GGTGGTGAAG CGCTCCGGGG CGACCGAGCC GTTCAGCCGC
GACAAAGTCG TCGGCGGCGT GCGCAAGGCG TGTCAGGGCC GACCGGTGAC CGAGGGCCAG
TTGGCCGTGC TCGCCCAGCG GGTGGAGGAC GTGCTGCGGG CCGCAGGGTC GGCGGAGATC
GCCGCCCACG AGGTCGGGCT GGCGATACTC GTCCCGCTCC GGGAGCTCGA CGAGGTCGCC
TACCTGCGCT TCGCTTCGGT GTACCGGGCC TTTGAGTCCT TGGAGGACTT CGAGGCCGAG
ATTTTGATGT TGCGCGCGGA GCGCGAACGG GCCTGA
 
Protein sequence
MHCPFCKHDD SRVVDSRSSE DGTSIRRRRQ CPECGRRFTT VESAQLLVVK RSGATEPFSR 
DKVVGGVRKA CQGRPVTEGQ LAVLAQRVED VLRAAGSAEI AAHEVGLAIL VPLRELDEVA
YLRFASVYRA FESLEDFEAE ILMLRAERER A