Gene Caci_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1811 
Symbol 
ID8333154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2054288 
End bp2056087 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content70% 
IMG OID644954961 
ProductIucA/IucC family protein 
Protein accessionYP_003112573 
Protein GI256391009 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCTT CGGCCCGCAA TCTCCGTGCC GAGACCGGCG CGGCTTCCGA ATCCTGGCGC 
AAGGCGGCGC GCGCGCTGCT GGCGAAGTGC GTCGGCGAGT TCTGCTACGA GGGATTGCTC
GCCCCCGATC CCGATCCCGA AGCCGAGAGC GCCGACCACT ACCGCCTGGA CCTGGACCAG
GGTGTCTGCT ACCGGTTCCG CGCGGACCGC GGCGACTACG GCTCCTGGTT CGTCGACCCC
GAGTCCCTGC GCCGCTCCGA GCGCGGCGCG GACAGCACGC CGCACGACCC GCTGCTGTTC
GTCCGCGACG CCCAGGGCCG CCTGGAGCTG CCCGGCGACA CCGCCGGCCA CCTGGTGCGC
GAGCTGGCGG CGACGCTGGC GGCGGACGTG TGCCTGGCGC GCTCTGCGCT CACCGCGGCC
GAGCTCGCCG ACCTGTCCTA CGCCGAGCTC GAGGGCCACA TGACCGGCCA CCCCTGGATC
GTGTTCAACA AGGGGCGGTT CGGCTTCTCG GCTTCCGACG CCCTGCGCTA CACCCCCGAA
GCCCGGCACC ACATGCGCCT GCCCTGGATC GCGGTGGACC AGGACCTCGC GGAGTTCAAC
GCGGTCCGGA ACCTGACCTC GCAGCGCCTG TACACCACCG AGCTGGACTC CAACACCCGC
ATCCGCTTCG GCTCCGAGCT GGTCCGCAAC GGCTTCAACC CGGCGCGCTA CTGGTGGCTG
CCGGTCCACC CCTGGCAGTG GGACGAGATG ATCCAGCCCT TGTACGGCGC CGAAGTGGCC
GCCGGGCTGA TCGTCCCGCT GGGGTACGCC GACGACGAAT ACCTGCCGCA GCAGTCGATC
CGGACGTTCT CCAACATCAC GCATCCCCAG CGCCACCACG TGAAGCTGCC GCTGTCGGTG
CTGAACACGA TGGTCTGGCG CGGGCTGCCG ACCGAGCGCA CCGTGGCGGC GCCGGCGGTG
ACCTCCTGGC TGCTGGACAT CGCCGACGCG GACCCGTTCC TGAACGACGA GTGCCGCGTG
ATCCTGCTCG GCGAGGTGGC CTCGGTGGCG GTGCGCCACC CGGTGCTGGA CCAGATGCCG
GACGCGCCGT ATCAGTACCG CGAGCTGCTC GGCGCGATCT GGCGCCAGCC GCTGCCGCCG
CGCCTGGAGC CGGGGGAGCG GGCCCGCACG ATGGCCTCGC TGCTGCACAC CGACAGCGAG
GGGCGCCCGC TGGTGGTGGA GCTGGTCAAG CGCTCTGGGC TCGACGGCGC GGACTGGCTG
GACAAGCTGT TCGCCGCGGT CCTGCCGCCG CTGCTGCACT TCCTCTACAA GTACGGCATC
GTCTTCTCCC CGCACGGGGA GAACGCGGTG CTGGTCAACG ACGAGCGGGA GTGGCCGAGC
CGGCTGGCCG TGAAGGACTT CGTCGACGAC GTGAACATCT CCGCCAAGGA CCTCCCCGAA
CTGGCGGAGA TCCCCGCCGA GGTCTCAGCG GTCATGCTCC GCGAGATGCC GGACTATTTG
TGCCAGTTCA TCCACGCGGG ACTGTTCGTC GGCCATTTCC GCTACCTGTC GCGGATCGCC
GAGCAGCACC TGGGCGTCGA CCCGCGGCTG TTCTGGGGTC TGGTCGCCGA CCGGATCCTG
GACTACCAGG CCACCTTCCC CGAGCTCGCC GACCGCTTCG AGGCCTTCGA CCTGTTCACC
CAGCGGATCG ACCGGCTGTG CCTGAACCGG AACCGGCTGC TGCTGGACGG ATACCGCGAC
CGCGCGGAGC GGCCGCACGT CGAGGCGTAC GGAACGGTGG CCAATCCGCT GAGTCTGTAG
 
Protein sequence
MSPSARNLRA ETGAASESWR KAARALLAKC VGEFCYEGLL APDPDPEAES ADHYRLDLDQ 
GVCYRFRADR GDYGSWFVDP ESLRRSERGA DSTPHDPLLF VRDAQGRLEL PGDTAGHLVR
ELAATLAADV CLARSALTAA ELADLSYAEL EGHMTGHPWI VFNKGRFGFS ASDALRYTPE
ARHHMRLPWI AVDQDLAEFN AVRNLTSQRL YTTELDSNTR IRFGSELVRN GFNPARYWWL
PVHPWQWDEM IQPLYGAEVA AGLIVPLGYA DDEYLPQQSI RTFSNITHPQ RHHVKLPLSV
LNTMVWRGLP TERTVAAPAV TSWLLDIADA DPFLNDECRV ILLGEVASVA VRHPVLDQMP
DAPYQYRELL GAIWRQPLPP RLEPGERART MASLLHTDSE GRPLVVELVK RSGLDGADWL
DKLFAAVLPP LLHFLYKYGI VFSPHGENAV LVNDEREWPS RLAVKDFVDD VNISAKDLPE
LAEIPAEVSA VMLREMPDYL CQFIHAGLFV GHFRYLSRIA EQHLGVDPRL FWGLVADRIL
DYQATFPELA DRFEAFDLFT QRIDRLCLNR NRLLLDGYRD RAERPHVEAY GTVANPLSL