| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1806 |
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| Symbol | |
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| ID | 8333149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2046752 |
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| End bp | 2048206 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644954956 |
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| Product | 2,4-diaminobutyrate 4-transaminase |
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| Protein accession | YP_003112568 |
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| Protein GI | 256391004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000212834 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0412084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGC CCGCCGCCCC GCCCGCCGTT CCTTCGACCT CCCCGGCCGC CGCACCCGGC
GACGACGGGC CGACGGGCCC GGCCCGGCCC GCCCCGGCCG CGAAGATCCT GGCCCGGCAG
GCGGCGCGCG AATCGGCGGC CCGGACCTAC GCGCGCCACC TGCCGATCGT CCCGGTGCGG
GCGCAGGGCT CGTGGATCAC CGGCGCCGAC GGCCGCGACT ACCTGGACTG CCTGTCCGGC
GCCGGCACCC TCGCCCTCGG CCACAACCAC CCGGCGGTGC TCGCCGCGAT CCGCGAGGTG
CTGGACAGCG GCGCCCCGCT GCACGTCCTG GACCTGGCCA CGCCGGTGAA GGACGACTTC
ACCTCGGCGC TGCTGGAGGC GCTGCCGCCG GAGCTCGCGG CCGACTGCCG CGTCCACTTC
GCCGGGCCCA CCGGCGCCGA CGCGGTCGAG GCGGCGGTGA AGCTGGCGCG GACGGCGACC
GGGCGGCGTG GCGTGTTCGC CTTCACCGGC GCGTATCACG GCATGACCGC CGGTGCGCTG
GCGCTGACCG GGGCGAACGC GGTGCGCGAG CCGGCGGTGG CGGGCGACGC GTTCCTGACC
CGGCTGCCGT TCCCGCATCC GTACCGGTGC CCGTTCGGGC TGGGCGGGGC GCTTGGCGAG
GGGGCGTCGG CGGCCTATGT ACGTACTTTG CTGTCCGACC CGCACTCGGG CACGGCGGTC
CCGGCGGCGG TGGTGGTCGA GCCGGTGCAG GGTGAGGGCG GCGTGGTGCC CGCGCCGGAC
GGGTGGCTGC GCGCGCTGCG GGCGACGACG GCCGAGCACG GCGTCCCGCT GATCGCCGAC
GAGGTCCAGA CCGGCTTCGG CCGCACCGGC ACGCTGTTCG GCGTGGACCA CGCGGGCGTG
GTGCCGGACG TCATGGTCCT GTCGAAGGCG GTCGGCGGCG GCCTGCCCCT CGCGGTGGTG
GTCTACCGCG CCGAGCTCGA CCGCTGGTCC GAAGGCGCGC ACACCGGCAC CTTCCGCGGC
AACCAGCTCG CCATGGCAGC GGGAGCGGCG ACAATCCGCC ACATCCTCGC CGAGAACCTC
GCCGCCCGAG CAGCAGAGCT CGGAGAGCGA CTCACCACCC GTCTGACCAG ATATCAGGCC
CGCCACCCCC TCCTCGGCCA GATCCGAGGC CGCGGCCTGA TGCTCGGCAT GGAGATCGTC
GACCCCCACG CCACCCCCGA CGCCCTAGGC GCCCTCCCCG CAGCACCCCT GACAGCACGC
AGGCTCCGCG CCGAACTCCT CTCCCGAGGC GTGATCGCCG AACTAGGCGG CCGCCACGCC
GCAGTCCTCC GCCTCCTCCC ACCCCTCACC CTCGCCGACG ACGAAGCCGA CCACCTGATG
ACCACCCTGC ACCAAGCCCT CGACGCAGTC GCCGACCACA CCACCACCCG CAACCTGGAG
GCAGCCGGTG TCTGA
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| Protein sequence | MPSPAAPPAV PSTSPAAAPG DDGPTGPARP APAAKILARQ AARESAARTY ARHLPIVPVR
AQGSWITGAD GRDYLDCLSG AGTLALGHNH PAVLAAIREV LDSGAPLHVL DLATPVKDDF
TSALLEALPP ELAADCRVHF AGPTGADAVE AAVKLARTAT GRRGVFAFTG AYHGMTAGAL
ALTGANAVRE PAVAGDAFLT RLPFPHPYRC PFGLGGALGE GASAAYVRTL LSDPHSGTAV
PAAVVVEPVQ GEGGVVPAPD GWLRALRATT AEHGVPLIAD EVQTGFGRTG TLFGVDHAGV
VPDVMVLSKA VGGGLPLAVV VYRAELDRWS EGAHTGTFRG NQLAMAAGAA TIRHILAENL
AARAAELGER LTTRLTRYQA RHPLLGQIRG RGLMLGMEIV DPHATPDALG ALPAAPLTAR
RLRAELLSRG VIAELGGRHA AVLRLLPPLT LADDEADHLM TTLHQALDAV ADHTTTRNLE
AAGV
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