| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1804 |
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| Symbol | |
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| ID | 8333147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2043490 |
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| End bp | 2044320 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644954954 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003112566 |
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| Protein GI | 256391002 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.128108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CAGATCCGTC TTTCCTGTCC ACCGCCCCGC TGACCCGCCT GCTGCTGGGC
CGCCGCGCCT TCGGCCCGAT GGGCGGCGGC AAGGCCGGGG TCCTGGTCGA GCGCAACCTG
ATGGTCTACC GGCGGCTGTG GCTGACCATG GTCTCCGGCT TCTTCGAGCC CGTGTTCTAC
CTGCTGTCGA TCGGCGTCGG GCTCGGCAAG CTCACCGGCG CGGTGGACGG TGTGCCCTAC
GCCCACTACG TCGCCCCCGG CCTGCTCGCG GTCTCGGCGA TGAACGGCGC GGTGTTCGAC
GCCACCTTCA ACGTCTTCTT CAAGATCAAG TACGGCAAGA TCTACGACGC GATGCTCGCC
ACCCCGCTGC GCGTGGGCGA CATCGCCCTC GGCGACATCG TCTGGGCGCA ACTGCGCGGA
CTGATGTACT CCGCGGCGTT CCTCCTGGTG ATGCTGGTGA TGGGTTTGGT CCACAGCTGG
TGGGCGTTGC TGGCGCTGCC GGTGACGGTC CTGATCGGCT TCGCCTTCGC CGCGGTCGGC
ATGGCCAGCA CCTCCTTCAT GCGCTCCTGG CAGGACTTCG ACCTGGTGAC CCTCGCGCTG
ATGCCGATGT TCCTGTTCTC CGGCGCCTTC TACCCGCTGT CGGTCTACAA CCACCAGGTC
AGGGTGCTGA TCGAGATCCT GCCCCTGTAC CACGGCATCG ACCTTCTTCG AGCCCTGACC
CTGGGACGGG TCCACATCGG CCTGCTGTGG GACGTGCTGT ACCTCGCGGC GATGGGCCTG
ATCGGGGCGG CGGTGGCGGC GCGGCGGCTG GAAAAGCTCC TGCTCACGTA G
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| Protein sequence | MTTADPSFLS TAPLTRLLLG RRAFGPMGGG KAGVLVERNL MVYRRLWLTM VSGFFEPVFY
LLSIGVGLGK LTGAVDGVPY AHYVAPGLLA VSAMNGAVFD ATFNVFFKIK YGKIYDAMLA
TPLRVGDIAL GDIVWAQLRG LMYSAAFLLV MLVMGLVHSW WALLALPVTV LIGFAFAAVG
MASTSFMRSW QDFDLVTLAL MPMFLFSGAF YPLSVYNHQV RVLIEILPLY HGIDLLRALT
LGRVHIGLLW DVLYLAAMGL IGAAVAARRL EKLLLT
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