Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1802 |
Symbol | |
ID | 8333145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2041567 |
End bp | 2042589 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954952 |
Product | ABC transporter related |
Protein accession | YP_003112564 |
Protein GI | 256391000 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.398486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACA TCTCCACCTC GCCCACCCCC GCCCTGATCT CCTCCTCCGA GGCGCCGCTG ATCAAGGCGG TGGGCCTGCG CAAGGTCTTC CCGCCGACCA AGCGCGGCGG CGATCCCTTC ACCGCCGTGG ACGGCATCGA CTTCGAGCTG CGCCGCGGCG AGGTTTTCGG CTTCCTGGGA CCCAACGGCG CCGGCAAGTC CTCGACCATG CGCATGATCG GCTGTGTCTC GCCGATGAGC GGTGGCGAGC TGACCATCCT GGGCATGGAC CCGCGGGTCG ACTCCTCCCG TATCAAGGCC CGGCTCGGTG TGGTCCCGCA GGAAGACTCG CTGGACATGG AGCTGCGGGT GCGCGAGAAC CTGCTGATCT ACGGCCGGTA CTTCGGGCTC AAGCGCGCCG AGATCGCCGC GCGGACCGCC GAGCTGTTGG ACTTCGTGCA GCTCTCGGAC CGTGCCGAGT CCCCGGTCGA GCCGCTCAGC GGCGGCATGA AGCGGCGTCT GACGATCGCC CGCTCGCTGA TCAACTCCCC GGAGATCCTG ATCCTGGACG AGCCCACCAC CGGGCTCGAC CCGCAGGCCC GGCACGTGGT CTGGGACCGG CTGTTCCGGC TCAAGCAGGC CGGCACCACG CTCATCCTCA CCACGCACTA CATGGACGAG GCCGAGCAGC TCTGCGACCG GCTGGTCGTG ATGGACCACG GCCGGATCGC CGCCGAGGGC TCGCCGCGCG AACTCATCGA GCGCTATTCG ACGCGCGAGG TGCTCGAGAT CCGCTTCGCG CCGGACGGCG AGGACCGCGC GGCCGCCACC GAGGCGCTCG CGGCGCTGGT CGGTACCGGG GAGCGCGGCG CGGTCGAGCG CATAGAGGAG CTGCCGGACC GGGTCCTGCT GTACAGCGAC GACGGCGAGG CCTCGCTGAC CGCCGTCCAC GGCTCCGGGA CCGTGCCGGT GGCCTCGCTG GTGCGGCGCT CGTCGCTGGA GGACGTGTTC CTGCACCTGA CCGGACGGAC GTTGGTGGAC TGA
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Protein sequence | MVDISTSPTP ALISSSEAPL IKAVGLRKVF PPTKRGGDPF TAVDGIDFEL RRGEVFGFLG PNGAGKSSTM RMIGCVSPMS GGELTILGMD PRVDSSRIKA RLGVVPQEDS LDMELRVREN LLIYGRYFGL KRAEIAARTA ELLDFVQLSD RAESPVEPLS GGMKRRLTIA RSLINSPEIL ILDEPTTGLD PQARHVVWDR LFRLKQAGTT LILTTHYMDE AEQLCDRLVV MDHGRIAAEG SPRELIERYS TREVLEIRFA PDGEDRAAAT EALAALVGTG ERGAVERIEE LPDRVLLYSD DGEASLTAVH GSGTVPVASL VRRSSLEDVF LHLTGRTLVD
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