Gene Caci_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1798 
Symbol 
ID8333141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2037761 
End bp2038504 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID644954948 
Productpeptidase C26 
Protein accessionYP_003112560 
Protein GI256390996 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.720671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGC CTCTCATCGG ACTGAGCATG TACCAGGAGA CGGCTTCGTG GGGCGCGTGG 
AAGAACGTGC CCGCCTCGCT GCTCCCGCAC GCGTACGTCG AATCGGTGAC CCGGGCCGGC
GGGGTCCCGT TGCTGTTGCC TCAGCATCTC GAGCACGACG CCGACGACCT GAACAAGGCC
GAGGCCGAGG AGGTCGTCGG GATCCTGCAC GGCCTGATCC TCACCGGCGG TCCGGACATC
GATCCCTCCG GCTACGGCGC GGTCCGCCAC CTGGACACCG ACAGCCCGCG CAGAGGGCGC
GACGCCTGGG AGTTCGCGCT GCTGGCCGCA GCGCTCGCGC GCAACATCCC GGTGCTGGCC
ATCTGCCGCG GGTTCCAGCT GCTGAACGCC GCCCTCGGCG GCACGCTGCG CCAGCACCTG
CCCGACGAAT CGGTGTTCGG CGACGCGCAC CGCAAACAAC TCGGACAGTT CGCCGCGGTC
CGCATCGACC TGGACCCGGC GGCGCCGCCC GGACGCGTGC TGGGCACCCA GATCATCGCC
TGGTGCCATC ACCATCAGGG CATCGACAAG CTGGGGGCGG GCCTGCAATC CTCGGGCAAC
GCCCCCGACG GCTTGATCGA GGCGGCGTGG ATGCCCGAGA AGGACTACGT GGTGGGGGTG
CAGTGGCACC CCGAGGAAGA CAGCAAGCCG GAGCTGTTCC GCTCCCTGAC CGACGCCGCG
ACCCGATACG CCAAAGGACG ATAG
 
Protein sequence
MPAPLIGLSM YQETASWGAW KNVPASLLPH AYVESVTRAG GVPLLLPQHL EHDADDLNKA 
EAEEVVGILH GLILTGGPDI DPSGYGAVRH LDTDSPRRGR DAWEFALLAA ALARNIPVLA
ICRGFQLLNA ALGGTLRQHL PDESVFGDAH RKQLGQFAAV RIDLDPAAPP GRVLGTQIIA
WCHHHQGIDK LGAGLQSSGN APDGLIEAAW MPEKDYVVGV QWHPEEDSKP ELFRSLTDAA
TRYAKGR