Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1794 |
Symbol | |
ID | 8333137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2034082 |
End bp | 2034816 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644954944 |
Product | Threonyl/alanyl tRNA synthetase SAD |
Protein accession | YP_003112556 |
Protein GI | 256390992 |
COG category | [R] General function prediction only |
COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.922708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGA CACCACATCT GCACACCCAG CGCCTCGAAC TCGACGACCA GACCCTCCGG GAATGGGACG CGAGCGTCCT GAAGTCCGAC GGCGAGGGCA TCGTCCTGGA CCGCTCCGCC TTCTACCCCG GCGGGGGCGG GCAGCCGCCG GACGAGGGGG TGCTCGTGTG GGGCGGTGTG CGGACCCGGA TCGTCGGCGT GCGCAAGGGC GACGACCTCG TGCTGATCCC GCACGACGAG GACCCGCTGC CGCCGGCCGG AACCGCTGTG CGCGGCGCCC TGGACGACGA GCGCCGCACC TGGCTCATGC GCACGCACTC CGGGCTGCAC CTGCTTTCCG GGGTCGTCTT CCGAGACTTC AACGCGCTGG TCACAGGCGG GAATATGGAA CCGGGGACGG CACGCATGGA TTTCAACCTC CCTGAGGTGC CCGCCGACTT CAAAGCCCGG ATCGAGGAGG CGTGCAACGT CGAGGTGGTC AAGGACCACC GGATCGACGT GAAGGTGCTG CCGCGCGAGG AGGCCTTCGC CATCCCGGAC ATCATCCGCA CCGCGACCAA CCTCGTGCCG CCGGAGCTGG AGGAAGTGCG GATCGTGGAC ATCGTCGGAC TCGACACTCA GGCGGACGGC GGAACCCATG TGGAGTCGAC GAGATGGATC GGCAAGATCG AGGTGTTGAA GGTGGAGAAC AAAGGCAAGG GCTTCCGGCG CTTGCGCATT GCCATCCGTG ACTGA
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Protein sequence | MTATPHLHTQ RLELDDQTLR EWDASVLKSD GEGIVLDRSA FYPGGGGQPP DEGVLVWGGV RTRIVGVRKG DDLVLIPHDE DPLPPAGTAV RGALDDERRT WLMRTHSGLH LLSGVVFRDF NALVTGGNME PGTARMDFNL PEVPADFKAR IEEACNVEVV KDHRIDVKVL PREEAFAIPD IIRTATNLVP PELEEVRIVD IVGLDTQADG GTHVESTRWI GKIEVLKVEN KGKGFRRLRI AIRD
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