Gene Caci_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1794 
Symbol 
ID8333137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2034082 
End bp2034816 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID644954944 
ProductThreonyl/alanyl tRNA synthetase SAD 
Protein accessionYP_003112556 
Protein GI256390992 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.922708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA CACCACATCT GCACACCCAG CGCCTCGAAC TCGACGACCA GACCCTCCGG 
GAATGGGACG CGAGCGTCCT GAAGTCCGAC GGCGAGGGCA TCGTCCTGGA CCGCTCCGCC
TTCTACCCCG GCGGGGGCGG GCAGCCGCCG GACGAGGGGG TGCTCGTGTG GGGCGGTGTG
CGGACCCGGA TCGTCGGCGT GCGCAAGGGC GACGACCTCG TGCTGATCCC GCACGACGAG
GACCCGCTGC CGCCGGCCGG AACCGCTGTG CGCGGCGCCC TGGACGACGA GCGCCGCACC
TGGCTCATGC GCACGCACTC CGGGCTGCAC CTGCTTTCCG GGGTCGTCTT CCGAGACTTC
AACGCGCTGG TCACAGGCGG GAATATGGAA CCGGGGACGG CACGCATGGA TTTCAACCTC
CCTGAGGTGC CCGCCGACTT CAAAGCCCGG ATCGAGGAGG CGTGCAACGT CGAGGTGGTC
AAGGACCACC GGATCGACGT GAAGGTGCTG CCGCGCGAGG AGGCCTTCGC CATCCCGGAC
ATCATCCGCA CCGCGACCAA CCTCGTGCCG CCGGAGCTGG AGGAAGTGCG GATCGTGGAC
ATCGTCGGAC TCGACACTCA GGCGGACGGC GGAACCCATG TGGAGTCGAC GAGATGGATC
GGCAAGATCG AGGTGTTGAA GGTGGAGAAC AAAGGCAAGG GCTTCCGGCG CTTGCGCATT
GCCATCCGTG ACTGA
 
Protein sequence
MTATPHLHTQ RLELDDQTLR EWDASVLKSD GEGIVLDRSA FYPGGGGQPP DEGVLVWGGV 
RTRIVGVRKG DDLVLIPHDE DPLPPAGTAV RGALDDERRT WLMRTHSGLH LLSGVVFRDF
NALVTGGNME PGTARMDFNL PEVPADFKAR IEEACNVEVV KDHRIDVKVL PREEAFAIPD
IIRTATNLVP PELEEVRIVD IVGLDTQADG GTHVESTRWI GKIEVLKVEN KGKGFRRLRI
AIRD