Gene Caci_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1793 
Symbol 
ID8333136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2033282 
End bp2034079 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID644954943 
Productprotein of unknown function DUF427 
Protein accessionYP_003112555 
Protein GI256390991 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATC CCCAGGTCGG GACCGGTCTG ATCCGAGAGG CGAAGAGCAT CATGGCGGAC 
AACGCCCGCG GGCGCGTGAA AGTGGAGACC GGCGCCAAGC GCGTGCGGCT GTACCTGGAG
AACCGGCTGG TGGCGGACAC GCTGACGCCG CTGCTCGTGT GGGAGAAGCC GTTCTACCCG
ACCTACTACG TCCCGGCGAA GGACGTCCTG GCCGACCTGA AGCCCACCGG CGAGTCCGAG
CACTCGCCGA GCCGCGGCGA CGCGCAGGTC CACGACGTCC TCCTGGCCGG CGCGACCGCG
CCCGGCAAGG CGCGCACGGT CCCGGAGTCC CCGCTGGAGG AGCTGCGCGA CGCGGTCCGG
TTCGACTTCG ACGCCTTCGA CTGGTTCGAA GAGGACGAGC CGATCTACAC CCACCCGCGC
GACCCCTACA GCCGCATCGA CGTCGTCGCC AGCAGCCGGC ACTTCCGCGC CGAGCTCGAC
GGCGTGCTCC TGGCCGACTC CCCGAACAGC ATGATCGCGT TCGAGACCGG CCTCCCGCCG
CGCTACTACG TCCCGATCAC CGCGCTGAAC CAGGACATCC TGCGCCCCTC GGAGACCGTC
ACGCACTGCC CCTACAAGGG CGCGGCGACG TACTGGTCGG TCCAGATCGG CGAGGAGGTC
CGCGACGACA TCATCTGGGG TTACCGGACG CCGTTCGCCG AAGTGCAGAA GATCGCCGGG
CTCGCCGCGG TCTACAACGA GAAGGTCGAC ATCTTCCTGG ACGGCGTTCT GCAGGAGCGT
CCGAAGCCGC GCTACTGA
 
Protein sequence
MTDPQVGTGL IREAKSIMAD NARGRVKVET GAKRVRLYLE NRLVADTLTP LLVWEKPFYP 
TYYVPAKDVL ADLKPTGESE HSPSRGDAQV HDVLLAGATA PGKARTVPES PLEELRDAVR
FDFDAFDWFE EDEPIYTHPR DPYSRIDVVA SSRHFRAELD GVLLADSPNS MIAFETGLPP
RYYVPITALN QDILRPSETV THCPYKGAAT YWSVQIGEEV RDDIIWGYRT PFAEVQKIAG
LAAVYNEKVD IFLDGVLQER PKPRY