Gene Caci_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1775 
Symbol 
ID8333118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2009187 
End bp2010377 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content74% 
IMG OID644954925 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_003112537 
Protein GI256390973 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC CCGCGGCTTC CGGCGCTGAC CGGTCGGACA TCGTGCTGCC CGCCTACGGT 
CGCGGCGCGC TGTCCGACCT GCTCCCCGCG GTGCTGGCGG CGCTCGGCGT CGAGGGCTCG
CCGGACCCGT TCGGCCTGGC GCCGACCCGC CGCGCCTGCG TCTTCCTGGT GGACGGTATG
GGCGCCCGGC TCATCGAGCG CAACGCCGAG GTCGCGCCGT ATCTGGCCAA GGCGCTGCGC
GCGAGCAGAG CGCTGACCGC CGGTTTCCCC TCCACGACAG CGGCCAGCAT CGGCTCGCTG
GGCACCGGTC TGCCCTCCGG CGCCAGCGGC ATGCTCGGCT ACCGGGTGCT GGTCCCGGGG
ACCTCGCGGA TGATCAATCT GCTGCGATGG GACGCCCCGG TCGATCCGGT CGAATGGCAG
CCGCACGAGA CCGTCTTCGA ACGCGCCGAG CGCGAGGGCA TCGAGGTCAC CCAGGTCACC
GCGGCCCGCT TCCAGGAGTC CGGCCTGACC CGCTCGGTCC TGCGCGGCGG CGCCTTCACC
GGCGCCGAGT CGCTGCCCAA CCGGGTCGCC GGCGCGCTGC AGACCTTGCA GGACGCCGCC
GACCGCGACG CCCGCGCGCT GGTCTACCTG TACTACGCCG ACCTCGACGC GGCCGGCCAC
CTCAACGGCG TGGACTCCGA GAGCTGGCGG CAGCAGCTGG CGGTCGTGGA CGCCACGGTG
CGCGAGCTCG TCGACCGGCT CCCGGCCGGT ACCGCGCTCT ACGTCACCGC CGACCACGGC
ATGGTCGACG TCCCCGCCGA GCGCCGGGTC GACGTGGACG AGGACTACGA GCTGCAGGTC
GGCGTCCGGC TGCTCGGCGG CGAGGGCCGG GCCCGGCATG TGTACGCCAA ACCCGGCGCG
GCGCGCGACG TGCTGCAGAT CTGGCGCGAG GCGCTGGAGG ACGTGGCGGT GGTCCGCTCC
CGCCAGGAGG CGATCTACGA GGGCTGGTTC GGCCCGCCGG AGAGCGTGGA CGACCGGCTC
GCGCCGCGCA TCGGCGACGT GGTCGCGGCG CTGCTGGAGG ACTGGGCCGT GGTCGCGACG
CGCCGGGAGA AGCTGGAGTC GCGGCTGCTG GGCATGCACG GCTCGCTGTC CGCGGCCGAG
CAGGAAATCC CGCTGTTGGT GTTCGCTCCC GAGGGCGGGC CGGGTTTGTA G
 
Protein sequence
MSVPAASGAD RSDIVLPAYG RGALSDLLPA VLAALGVEGS PDPFGLAPTR RACVFLVDGM 
GARLIERNAE VAPYLAKALR ASRALTAGFP STTAASIGSL GTGLPSGASG MLGYRVLVPG
TSRMINLLRW DAPVDPVEWQ PHETVFERAE REGIEVTQVT AARFQESGLT RSVLRGGAFT
GAESLPNRVA GALQTLQDAA DRDARALVYL YYADLDAAGH LNGVDSESWR QQLAVVDATV
RELVDRLPAG TALYVTADHG MVDVPAERRV DVDEDYELQV GVRLLGGEGR ARHVYAKPGA
ARDVLQIWRE ALEDVAVVRS RQEAIYEGWF GPPESVDDRL APRIGDVVAA LLEDWAVVAT
RREKLESRLL GMHGSLSAAE QEIPLLVFAP EGGPGL