| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1770 |
|---|
| Symbol | |
|---|
| ID | 8333113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2004038 |
|---|
| End bp | 2004850 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644954920 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003112532 |
|---|
| Protein GI | 256390968 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAAC GCCACGAGCT GGACGCCTTC CTCACGCTGG CCGAGCAGCT GCACTTCGGC
CGCACCGCCG AGCTGCTGAC CGTCTCCCCG GCCCGCGTCA GCCAGACGAT CGCGAAGCTG
GAGCGCCGTA TCGGCGTGCG CCTCTTCCAT CGCACGAGCC GCCGGGTCGA GCTGACCGCG
GCGGGCCGGG AGCTGTACGC CGAACTGCGT CCGGCCTGGA CCGCGATCAC CGAGGCGGTC
GCGCGGGCGA CCGAGGCCGG CCGGGGCGTC ACCGGGACGC TGCGCGCGGC GTTCGTCGGA
GCCGCCGGCG GCCAGCTGCT CGTCGGGGCG GCGGAGGCGT TCGGCAAGAG CTTCCCGGAC
TGCGAGGTCG TGGTCCGCGA GGCGCAGTTC GGCGACGTCG GACCGTGGCT GGCGAACGAC
GAGGTCGACG TGGTGCTGAG CACCCGCGAG ACGGACGTGC CGGGCACGGT TCAGGGCGCG
ACGCTGGTAA GCGAGGCGCG GATGCTCGCC GTGGCGCTGG GGCATCCCTT CGCGCGCCGT
CAGACGGTCT CGCTGGCGGA CGTGGCCCGC ACGACGCCTG TCGAGGCGCA GGCGACGCTC
CAGGAGACGC TGACGCTCGT GGGAGCGGGA CGCGGGGTGG CGGAGGTCGG CGCGCAGACC
CGGCGCTACT ACCCGAGGCC TGATGTGGTG TATGTCCCGA TCAGCGACGC GCCGCCGGTG
CGGTGGTGCC TGCTGTGGCA CGAGGACCGC GAGACGGCGC GGGTGCGGGC CTTCGACCAC
GTCTTGGACG AGCTGGTGCG CTCGGCGCGC TGA
|
|---|
| Protein sequence | MLERHELDAF LTLAEQLHFG RTAELLTVSP ARVSQTIAKL ERRIGVRLFH RTSRRVELTA
AGRELYAELR PAWTAITEAV ARATEAGRGV TGTLRAAFVG AAGGQLLVGA AEAFGKSFPD
CEVVVREAQF GDVGPWLAND EVDVVLSTRE TDVPGTVQGA TLVSEARMLA VALGHPFARR
QTVSLADVAR TTPVEAQATL QETLTLVGAG RGVAEVGAQT RRYYPRPDVV YVPISDAPPV
RWCLLWHEDR ETARVRAFDH VLDELVRSAR
|
|---|
| |