Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1768 |
Symbol | |
ID | 8333111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2002033 |
End bp | 2002980 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954918 |
Product | ABC transporter related |
Protein accession | YP_003112530 |
Protein GI | 256390966 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC TTCAGGAGCT TGAGTTCGCC GCCGGGCGGC CGAAAGAGAT CTACGGCGAG GACGCCAAGA TCGTCTGCGA CAACCTGGTC CGCATCTACA AGACCGACGG CATCGAGGTC CAGGCTCTGC AGGGTCTGGA CCTGCTGGTG CGCGCCGGGG AGCTGGTCGC GATCGTCGGC GCCTCCGGCA GCGGCAAGTC CACGCTGCTG AACATCCTGT CCGGGCTCGA CACCCCGACC GCCGGCGTCG CCAGGGTCGG CGGCTATGAC CTGCTCACCA TGAAGAGCCG GGACCGGCTG CGCTACCGGC GCTCGACGGT CGGCTTCATC TGGCAGCAGA CGGCGCGCAA CCTGCTGCCC TACCTCAACG CCGCCGACAA CGTGGCGCTG CCGATGGGCT TCGCCGGCAA GAAGCGCAAG TACGCGCGGC GCCGCTCCGG GGAGCTGCTG GACCTGCTGG GCGTCGGCCA CTGCGCCGGG CGCCGCCCCG GGCAGATGTC CGGCGGCGAG CAGCAGCGGG TCTCGATCGC GGTGGCGCTG GCCAACGACC CCGAGGTGGT GTTCGCCGAC GAGCCGACCG GCGAGCTGGA CTCCGCGACC AGCCAGCAGG TCTTCGACGC GCTGCGCACC GCGAACGAGG AGCTGGGCGT CAGCATCGTG GTGGTCACGC ACGACCACGA GGTGACCGAC CAGGTCCAGC GCACCGTGGA GATCCGCGAC GGCCGCACCT CGAGCGAGGT CCTGCGGCGC GGCGACGAGG GCGCGCGGGC CGAGCAGTTC GCGGTCCTGG ACCGCGCCGG CCGCGTGCAG TTGCCGAAGG AGTACGTGGA CGCGCTGCGG ATGAAGGACC GGGTCCGGCT GGCGAAGAAC CCTGATCACA TCGGGGTCTG GCCGGATCTG GCGCAGGGCT CTGATGGTGC CGCAGGTTCC GTGGGCGAGA GGGCGTAG
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Protein sequence | MSTLQELEFA AGRPKEIYGE DAKIVCDNLV RIYKTDGIEV QALQGLDLLV RAGELVAIVG ASGSGKSTLL NILSGLDTPT AGVARVGGYD LLTMKSRDRL RYRRSTVGFI WQQTARNLLP YLNAADNVAL PMGFAGKKRK YARRRSGELL DLLGVGHCAG RRPGQMSGGE QQRVSIAVAL ANDPEVVFAD EPTGELDSAT SQQVFDALRT ANEELGVSIV VVTHDHEVTD QVQRTVEIRD GRTSSEVLRR GDEGARAEQF AVLDRAGRVQ LPKEYVDALR MKDRVRLAKN PDHIGVWPDL AQGSDGAAGS VGERA
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