Gene Caci_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1765 
Symbol 
ID8333108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1999507 
End bp2000172 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID644954915 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003112527 
Protein GI256390963 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG TGCCGCTGAC CGGAGTCAAG AACGCACGCG ACATCGGGGG GATCTCGACG 
GACTCGGGCG CGGTGGTGCA GCCATTGCGC CTGTTGCGCA CCGCGCGCCT GAACCGCCCG
ACCGACGCCG ACCTCGCCTG GCTGGCCTCG ATCGGGCTGC GGACGGTGGT GGACCTGCGC
CAGCACTTCG AGATCGTGGC GTGGCCGGAC CAGCTCGGCG ACCTGCCGGT CGAGCGCGTC
AACGTCGCAC CGAGCCTGGA CAGCGAGGGC GCCGGAACGT TCTTCGAGCT GTACCTGGCC
TGGCTGGACG AGAGCGGGCA CGCCTTCGCC GACGCCGTCC ACGCCCTGGC CAAGCCCGGC
GCGCTGCCGG CACTGGTGCA CTGCACGGCG GGCAAGGACC GGACCGGCGT GCTGGTGGCG
CTGGTGCTGG ACGTGCTGGG CGTCGGGGAG AAGGCGATCG TCGCGGACTA CCTGATCTCG
AACGAGCGGC TCACGACCGA TCCGGGGGAC ATCACCTTCC AGCACCCGAT CAGCGAGGAC
CTGATCTCGG GCTCGCTGGC CCACGTGCGG GCGCGATACG GCAGCGCCGA GGGGTACTTA
CTGGCGCACG GGGTGAGCGA CGAGGAGATC GCGGCACTGC GGGAGGCTTT GCTGGGCGAG
GGTTAG
 
Protein sequence
MSDVPLTGVK NARDIGGIST DSGAVVQPLR LLRTARLNRP TDADLAWLAS IGLRTVVDLR 
QHFEIVAWPD QLGDLPVERV NVAPSLDSEG AGTFFELYLA WLDESGHAFA DAVHALAKPG
ALPALVHCTA GKDRTGVLVA LVLDVLGVGE KAIVADYLIS NERLTTDPGD ITFQHPISED
LISGSLAHVR ARYGSAEGYL LAHGVSDEEI AALREALLGE G