Gene Caci_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1747 
Symbol 
ID8333090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1977098 
End bp1978075 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content77% 
IMG OID644954897 
Productprotein of unknown function DUF59 
Protein accessionYP_003112509 
Protein GI256390945 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.335783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG ACGAGTTGGT GGCGCTCGAT CCGGTGACGC TCGACCTGGC GGCGCTCGAA 
GCTGCCGCAT CGGCGGTCCC GGATCCGGAG CTGCCGGTGG TGACCCTCGG CGACCTGGGC
ATCATCCGCG GCGTGTCGCT GACGGACGAC GGCGCGATCG AGGTGCGCAT CACCCCGACC
TTCGTGGGCT GCCCGGCGAC CGAGGCCATC GCGGCGGACG TGCGCGTGGC AGTCGCCGCC
TGCCTGCGCG AATCCGGCGC GCCGCAGACC GAGGTGCGCA CGCGCACGGC GATGTCGCCG
GCGTGGAGCA CCGACTGGAT CAGCGAGGAC GGCCGCCGCA AGCTTGCCGA GCACGGCATC
GCGCCGCCCA GCGGCGGTGC GCGACACCGC GGCGGGCCGG TCGCGGTGAC GATCGGGCGC
GGCGGCGTGG GCGATGGGGG CGCGGACGCG GGTGCGGGCG TGGTGTCGGC GGGCAGCGCG
CAGTCGGCGG GCGGCGTGGT GTCGGCGGGC GGCGCACAGT CGGCGGGCAG CGCGGCGCTG
GCGGGCAGCG CAGAGTCAGC CGGCGGCGCG GGCGATGGTG GCGCAGGCGC AGGCGCGGTG
GTGGGCGTGG TGTCGGCGGG CAGCGCGCAG TCGGCCGGCG GCGCGGTGGA GGCGGGCAGC
GCGCAGTCAG CCGGCGGCGT GGGCGATGAT GGCGCGGGCG CGGGCGCGGG CGTGGGTGCG
GTGGTGGGCG TGGCGTCGGC GGGCAGCGCG CAGTCGGCCG GCGGCGTGGT GTCGGCGGTG
AGTGGCTCCT CTTCCTCTCC TTTCCCCTCC CCCCACCCAC CCACCCAACA TCGCGCAGCA
CAGCGTGCAG CGCAGAGCTG TCCCCGGTGC GGCAGTGGCG ATACGCGCGA GCTCAGCGCG
TTCGGCAGTA CGCCGTGCCA GTCCCTGCGT GCCTGTCGGG CGTGCGGGGA GCCGTTCGGG
GCTATCAAGT CCCTGTGA
 
Protein sequence
MATDELVALD PVTLDLAALE AAASAVPDPE LPVVTLGDLG IIRGVSLTDD GAIEVRITPT 
FVGCPATEAI AADVRVAVAA CLRESGAPQT EVRTRTAMSP AWSTDWISED GRRKLAEHGI
APPSGGARHR GGPVAVTIGR GGVGDGGADA GAGVVSAGSA QSAGGVVSAG GAQSAGSAAL
AGSAESAGGA GDGGAGAGAV VGVVSAGSAQ SAGGAVEAGS AQSAGGVGDD GAGAGAGVGA
VVGVASAGSA QSAGGVVSAV SGSSSSPFPS PHPPTQHRAA QRAAQSCPRC GSGDTRELSA
FGSTPCQSLR ACRACGEPFG AIKSL