Gene Caci_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1742 
Symbol 
ID8333085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1973214 
End bp1973981 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content72% 
IMG OID644954892 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003112504 
Protein GI256390940 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.278826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.411679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGC TCAAGACGCC GCAGGAGATC GACAAGATGG CGGTCACCGG CCGATTCGTC 
GGCGAGACCC TGCTCGAACT GGCCGAGCTG GCGCGCCCCG GCGTGAACCT GATGGACCTG
GAGCAGCGCG CCCGCCGCCG CATCAAGGAG CGCGGCGCGG TGTCCTGCTA TTGGGACTAC
GCCCCCTCCT TCGGCCGCGG CCCGTTCGCC AACGTCATCT GCCTGTCGGT GAACGACGCC
GTCCTGCACG GCCTCCCCCA CAAGTACACC CTGCGCGACG GCGACGTCCT GACCCTGGAC
TTCGCGGTCT CCATCGACGG CTGGGTCGCG GACTCGGCCC GCACAGTGAT CGTCGGCACC
CCCCGCCCGG AAGACGTCCG CCTGGTGGAG TCCACCGCCG TCGCCCTGGA AGCCGCCATC
GCCGCCGCAC TCCCCGGCAA CAAGCTCGGC GACATCAGCG CCGCCATCGA AGCCGTCGCC
ACCGACTACG GCTACCCGGT CAACCTCCAG TTCGGCGGCC ACGGCCTAGG CCACACCATG
CACGAGGACC CCCACGTCGC CAACGCCGGC CGCGCCGGCC GCGGCCTGGT CCTGCGCCCC
GGCCTGACCC TCGCCCTCGA ACCCTGGTGG TCCGCCACCT CCAGCGAGAT CTTCACCGAC
CCCGACGGCT GGACCCTCCG CTTCCAGGAC GGCTCCCGCG GCTCCCACTC CGAGCACACC
ATCGCCGTGA CGGAGGACGG GGCGCGGGTG CTGACGCGGG TGGACTGA
 
Protein sequence
MIELKTPQEI DKMAVTGRFV GETLLELAEL ARPGVNLMDL EQRARRRIKE RGAVSCYWDY 
APSFGRGPFA NVICLSVNDA VLHGLPHKYT LRDGDVLTLD FAVSIDGWVA DSARTVIVGT
PRPEDVRLVE STAVALEAAI AAALPGNKLG DISAAIEAVA TDYGYPVNLQ FGGHGLGHTM
HEDPHVANAG RAGRGLVLRP GLTLALEPWW SATSSEIFTD PDGWTLRFQD GSRGSHSEHT
IAVTEDGARV LTRVD