| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1741 |
|---|
| Symbol | |
|---|
| ID | 8333084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1972663 |
|---|
| End bp | 1973217 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954891 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_003112503 |
|---|
| Protein GI | 256390939 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0937036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.375593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGAG AGCCGACGAC CACGGCGCGT TTGGTGCTGA ATTCCGTGAC GGAAGCCGAC
GCCCGGGAGA TGGCGGAAGT CCTGGCCGAC CCGGAGCTCT ACACCTTCAT CGGCGGGGAG
CCGCCGACCC CGGAGGGTCT GCGCGCGCGG TATGCCCGGC TCGCTGTGGG GCGTTCCCCC
GACGGTTTGC AAGAATGGGT CAACTGGATC GCCCGGCGCG CGCAGGACGG CGCCGCGGTC
GGCACCGTGC AGGCGACGGT GGTCGACGGC GGCCGGCGCG CGGACGTGGC GTGGGTCGTC
GGCACGGCGT GGCAGGGCCG CGGGTACGCG GTCGAGGCGG CGTCGGCGCT CGTGGCGTGG
CTGCGGGAAC GGGGTGTGGC GGAGATCCGC GCGAACATCC ATCCCCGGCA CGCGGCCTCG
GCGAAGGTGG CCGAGCGCAT CGGCCTGGCG CCGACCGGCG AGACGGACGG CGAGGGCGAA
CAGATCTGGC GCGCGCAGGG TGCGCCGGAG CACGTGCTGG ACGAGGATCC CGAACGGACG
GAGAAGACCC GGTGA
|
|---|
| Protein sequence | MFREPTTTAR LVLNSVTEAD AREMAEVLAD PELYTFIGGE PPTPEGLRAR YARLAVGRSP
DGLQEWVNWI ARRAQDGAAV GTVQATVVDG GRRADVAWVV GTAWQGRGYA VEAASALVAW
LRERGVAEIR ANIHPRHAAS AKVAERIGLA PTGETDGEGE QIWRAQGAPE HVLDEDPERT
EKTR
|
|---|
| |