Gene Caci_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1730 
Symbol 
ID8333073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1959588 
End bp1960220 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID644954880 
Productprotein of unknown function DUF937 
Protein accessionYP_003112492 
Protein GI256390928 
COG category[S] Function unknown 
COG ID[COG3753] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.6083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTT TCGACATCTC TTCGCTGCTC AACCAGCTGA TGGGCAAACA GCAGCAGCAA 
CAGCAGCAGC CCCAGCCCGG CCAAGAGGGC CAGCCCGGCG AGCAGCAGAC GCAGCAGATG
CAGCAGCCGG GGATGCAACA GCCGGGCCAG GCGATGAGCG CGGCGCCCAG CAGCGGCGGC
GCCGGCGGGC TCGGCGGCCT GCTCAGCAGC GGCATGGTCC AGAAGCTGGC GCCGATGCTC
GGCAGCCTGG TCGCCGGCGG CGGTCTGGCC AAGCTCATGG AACAGCTCAA GGGCGGCGGA
CTCGGTTCTC AAGCGAAGTC CTGGGTCAGC ACCGAGCAGC CGAACCAGCC GGTCAGCGGC
GAGCAGCTCA CCCAGGCGCT GGGCACCGAG CAGATCTCGC AGTTCGCCAA CACCCTCGGC
ATGACCAACG AGCAGGCGGC GCGCACCATG GCCACGACGC TTCCGCAGGT CGTCGACGCG
ATGACGCCTG ACGGGCAGCT CCCGCAGACC GCGGCGGCCG GCGCGCCCGG CACGCCCGGC
ATGGAGAACC CGGCCGCCCC GCAGGCCCAG AACCGCCCGC AGACCGGTGG CGCCTCCGGC
GGAACGGGGG ATGGACGGCC GCAAGGGGGT TGA
 
Protein sequence
MAGFDISSLL NQLMGKQQQQ QQQPQPGQEG QPGEQQTQQM QQPGMQQPGQ AMSAAPSSGG 
AGGLGGLLSS GMVQKLAPML GSLVAGGGLA KLMEQLKGGG LGSQAKSWVS TEQPNQPVSG
EQLTQALGTE QISQFANTLG MTNEQAARTM ATTLPQVVDA MTPDGQLPQT AAAGAPGTPG
MENPAAPQAQ NRPQTGGASG GTGDGRPQGG