Gene Caci_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1724 
Symbol 
ID8333067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1954919 
End bp1955689 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID644954874 
ProductMyo-inositol catabolism IolB domain protein 
Protein accessionYP_003112486 
Protein GI256390922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG TCGACATCAC GCCCGAATCG GCAGGCTGGC GCTTTGCGGG ACTGAAGACC 
GCGGAGTTCG CCGGTTCATA TCAGTTCTTT ACCGCAGGAG ATGAGGCTTT AGTCCTGCCG
TTGTCCGGTT CGTGCCGAGT CCGGTGCGGC GCCGAGGAGT TCCAGTTGGC GGGGCGCAAG
GACGTCTTCG CAGGTCCCAG CGACTTCGCC TACATCCCGC GGGGCAGCGC CGTCCGGCTG
ACCGCGACCG ACGGCCCGTG CCGGGTGGCG ATCCCGACCG CGCGGGCGGA AACCGATCTG
CCGTTCCGGT ACGGCGCGCG CGAGGCGGTT CCGGTGGAGC AGCGCGGCGC CGGATCCTCC
GCGCGGACGC TGCACAACTT CTGCGCCCCG GAAGCCTTCG AGACCGACCG GCTGCTGGCG
GTGGAGGTGA TCACGCCGGG CGGGAACTGG TCGTCCTGGC CGCCGCACAA GCACGACGAG
GACGTCGAAG GCGGCGAGCG TGCCAAGGAG GAGATCTACT ACTACGAAGG CGGACCGGGC
TACCAGCGCG TCTACTCTTC GGCAGCCGGG GAGATCGACG TGCTGCGCGA GGTCAACGCC
GGGGACGTGG TGCTGATCCC GTACGGCTAC CACGGTCCGT CGATGGCGAT GCCGGGCTAC
GACCTGTACT ACCTGAATGT GCTGGCCGGC GGGGACCGCG GAGCGGGACG CTCCATGGCG
TTCAGCGACG ATCCGCGGCA CGCATGGGTA CGGCAGACCT GGAGCGCCTG A
 
Protein sequence
MTQVDITPES AGWRFAGLKT AEFAGSYQFF TAGDEALVLP LSGSCRVRCG AEEFQLAGRK 
DVFAGPSDFA YIPRGSAVRL TATDGPCRVA IPTARAETDL PFRYGAREAV PVEQRGAGSS
ARTLHNFCAP EAFETDRLLA VEVITPGGNW SSWPPHKHDE DVEGGERAKE EIYYYEGGPG
YQRVYSSAAG EIDVLREVNA GDVVLIPYGY HGPSMAMPGY DLYYLNVLAG GDRGAGRSMA
FSDDPRHAWV RQTWSA