Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1723 |
Symbol | |
ID | 8333066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1954093 |
End bp | 1954833 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644954873 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003112485 |
Protein GI | 256390921 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.776649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGATCC GACCGCGGAT CGAGGTGGAC CGCTCCTCCC CGATCCCGCT CTACTTCCAG GTCGCCGAGC AGATCGCCGA GGCGATCCGC ACCGGCGCGC TCCAGCCCGG CGACCAGCTG GACTCCGAGG TGCAGATCGC CGAGTCGCTC GGGCTGTCCC GGCCGACCGT GCGGCAGGCG ATCGGGCATC TGGTGGACCG CGGCATGATC GTGCGCCGGC GCGGCGTGGG CACGCAGATC CTGCCGATGC CGGTGCGCCG GGAGATGGAG CTCACCAGCC TGCACGACGA CCTGGCCCGC AGCGGGCGCG CGCCGGCCAC CGACGTGCTG CTGCTGGCGC GCGTCCCGGC CGAGCCGGAG GCCGCCACGG CGCTCGGGCT GCCGGCCGGT ACGCCGGTGA CCAAGGTGGT GCGGCTGCGC CGCTCGCAGG GCGAACCGCT GGCGGTGATG CGCAACTGGC TGCCCGAGCC GGTGCCGGCG CTGAGCGCGG AGCTGCTGGA GACCCGGGGA CTGTACGAGG TGCTGCGCAA GGCGGGGATC CGCATCTGCG TGGCCCGGCA GCGGATCGGC GCGTGCACCG CCGACGCCGA ACAGGCGGCG CTGCTGGAGG AACGGCGCGG CGCGGCCCTG CTGACCATGG AGCGCACGGC CTTCGACGAC AGCGGGCGGG CGGTGGAGTT CGGCAGCCAC ATCTACCGCG CGTCCCGGTA CAGCCTGGAA GTCACCGTCA CAGAGCACTG A
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Protein sequence | MGIRPRIEVD RSSPIPLYFQ VAEQIAEAIR TGALQPGDQL DSEVQIAESL GLSRPTVRQA IGHLVDRGMI VRRRGVGTQI LPMPVRREME LTSLHDDLAR SGRAPATDVL LLARVPAEPE AATALGLPAG TPVTKVVRLR RSQGEPLAVM RNWLPEPVPA LSAELLETRG LYEVLRKAGI RICVARQRIG ACTADAEQAA LLEERRGAAL LTMERTAFDD SGRAVEFGSH IYRASRYSLE VTVTEH
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