Gene Caci_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1723 
Symbol 
ID8333066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1954093 
End bp1954833 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content74% 
IMG OID644954873 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003112485 
Protein GI256390921 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.776649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATCC GACCGCGGAT CGAGGTGGAC CGCTCCTCCC CGATCCCGCT CTACTTCCAG 
GTCGCCGAGC AGATCGCCGA GGCGATCCGC ACCGGCGCGC TCCAGCCCGG CGACCAGCTG
GACTCCGAGG TGCAGATCGC CGAGTCGCTC GGGCTGTCCC GGCCGACCGT GCGGCAGGCG
ATCGGGCATC TGGTGGACCG CGGCATGATC GTGCGCCGGC GCGGCGTGGG CACGCAGATC
CTGCCGATGC CGGTGCGCCG GGAGATGGAG CTCACCAGCC TGCACGACGA CCTGGCCCGC
AGCGGGCGCG CGCCGGCCAC CGACGTGCTG CTGCTGGCGC GCGTCCCGGC CGAGCCGGAG
GCCGCCACGG CGCTCGGGCT GCCGGCCGGT ACGCCGGTGA CCAAGGTGGT GCGGCTGCGC
CGCTCGCAGG GCGAACCGCT GGCGGTGATG CGCAACTGGC TGCCCGAGCC GGTGCCGGCG
CTGAGCGCGG AGCTGCTGGA GACCCGGGGA CTGTACGAGG TGCTGCGCAA GGCGGGGATC
CGCATCTGCG TGGCCCGGCA GCGGATCGGC GCGTGCACCG CCGACGCCGA ACAGGCGGCG
CTGCTGGAGG AACGGCGCGG CGCGGCCCTG CTGACCATGG AGCGCACGGC CTTCGACGAC
AGCGGGCGGG CGGTGGAGTT CGGCAGCCAC ATCTACCGCG CGTCCCGGTA CAGCCTGGAA
GTCACCGTCA CAGAGCACTG A
 
Protein sequence
MGIRPRIEVD RSSPIPLYFQ VAEQIAEAIR TGALQPGDQL DSEVQIAESL GLSRPTVRQA 
IGHLVDRGMI VRRRGVGTQI LPMPVRREME LTSLHDDLAR SGRAPATDVL LLARVPAEPE
AATALGLPAG TPVTKVVRLR RSQGEPLAVM RNWLPEPVPA LSAELLETRG LYEVLRKAGI
RICVARQRIG ACTADAEQAA LLEERRGAAL LTMERTAFDD SGRAVEFGSH IYRASRYSLE
VTVTEH