Gene Caci_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1718 
Symbol 
ID8333061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1948583 
End bp1949806 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content72% 
IMG OID644954868 
ProductPHP domain protein 
Protein accessionYP_003112480 
Protein GI256390916 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.592231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGG ACGGCGTGTG GTGGCTGGAG GACCGGTTGC GGCAGCAGCT GCGCCCGGTC 
CCGTTCGAGG TGCCGGCCGG CGTCTCGCTG ATCGAGGTCC GGCTGGACTA CGACCGGTCC
GCCGGCGCCG TCCTGGATCT CGGCTGCGCC GGTCCCGAGG GCTTCCGCGG GTGGTCGGGC
GGAGCGCGGC AGGAGTTCGC GGTCGGCGCC CAGCGTTCGA CGCCGGGGTA TCTGCCCGGG
GAGATCCTGC CGGGGGTGTG GCATGTCTGG CTGGGGCTGC ACCGGGTCCC GCCGGAGGGC
GTCCGGTACT CGCTGGAGAT CACGTTCAGC GACAAGCGGG CGGCACGCAC TCTGGAGTAC
CGCAGCCACA GCGTCAGGGC CCTGCAACGC CCGCCGGCCC GCGAGCTGCC GGGCGTCGAG
GGTATGCGCT GGTACGCCGG AGACCTGCAC GCGCACACCG ACCACAGCGA CGGCACGCTG
AGCGTCGGCG CCCTGGCCGA GCTCGCGGCC GAGACCGGTC TGGACTTCCT GGCCGTCACC
GACCACAACA CGATCAGCCA CTACCCGTTG CTGGAGAAGC ATTCCGCGAC GTCCGGCGTC
ACGCTGATCC CGGGGCAGGA GGTCACGACC GACCTCGGCC ACGCGAACGT GTGGGGCGCC
AAGGAGTGGA TCGACTTCCG GCGCCCGGCT TCGCAGTGGA TGAAGCAGGC GGAGAAGGCC
GGCGCGCTGT TCTCGGTGAA CCATCCGCTG GCCGGGGACT GCGCCTGGCG GCACCAACTG
ACCACGCAGC CCTCGATCGC GGAGATCTGG CACTGGTCCT GGTTCGACCG CACCTGGGGC
TGGCCGCTGG CCTGGATGAA GCGGCATCCG GCGGCGATCA TCCCGGTCGG CGGCAGCGAT
TTCCACGAGC CCGGCGGCAC CCCGGCCTCG CTCGGCGCGC CGATCACCTG GGTGCTGGCC
GAGGAGTGTA TGACCTCTGC GATCCTCGCG GGCATCGCGG CGGGGCGCAC GGCGGTCTCC
GCCGACCGGA CCGGACCGCT CGTGCTGCGC TGCGGCGACG AGATCGCGGC GGTGGACGCC
GACGGGCTGA TCCTGGTGCG CCCGGACGAG ACGCGGGTCG TGGTGCGCGC GGACGGCGCC
GGACGGCAGT CGTTCCCGGC GACGCAATCG GGCATGTACC GGTTGGAGAC GTGGCGCAAC
GAGGTGGTGG CACTGTGCGC GTGA
 
Protein sequence
MRLDGVWWLE DRLRQQLRPV PFEVPAGVSL IEVRLDYDRS AGAVLDLGCA GPEGFRGWSG 
GARQEFAVGA QRSTPGYLPG EILPGVWHVW LGLHRVPPEG VRYSLEITFS DKRAARTLEY
RSHSVRALQR PPARELPGVE GMRWYAGDLH AHTDHSDGTL SVGALAELAA ETGLDFLAVT
DHNTISHYPL LEKHSATSGV TLIPGQEVTT DLGHANVWGA KEWIDFRRPA SQWMKQAEKA
GALFSVNHPL AGDCAWRHQL TTQPSIAEIW HWSWFDRTWG WPLAWMKRHP AAIIPVGGSD
FHEPGGTPAS LGAPITWVLA EECMTSAILA GIAAGRTAVS ADRTGPLVLR CGDEIAAVDA
DGLILVRPDE TRVVVRADGA GRQSFPATQS GMYRLETWRN EVVALCA