| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1710 |
|---|
| Symbol | |
|---|
| ID | 8333053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1939515 |
|---|
| End bp | 1940906 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644954860 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003112472 |
|---|
| Protein GI | 256390908 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.903063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCGC AGGGCACCGC TCAGGAACTG GCCGCGTTCG TCGCCGAGGC GGCGAAGGCG
TACGACGTGC CCGGCGTCAG CGTCGGCGTG CTGCTCGACG GACGCGAGTA CTTCACCTCG
GTCGACGTGG ACGAGCGGAC CCTGTTCCAC ATCGCCTCGG TGACGAAATC CTTTACCGCC
ACCGCGCTGA TGCGCCTGGC CGCCGAGGGA CGAATCGACC TGGAGGCACC GGTGCGGACC
TACGTGCCGG AATTGAAGCT GGCCGACGAG ACGCACGCCG CGCGCATCAC CGTCCGCAAC
CTGCTGGACC ACACCGGCGG CCTGGAGTGG AACCTGATCG ACACCGGATC CGGCACTGGC
ACGGACTCCG GCACAGCCGA CGGCGACGGC TCGCTCGCCG CGTTCGTCGC CAAGCTGGTC
GCGCTCCCGC TGATCGCCGA GCCCGGCGTC CGCGCCTCGT ACAGCCAGGC CGGGTACAAC
CTGCTGGGCC GGGTGATCGA GAAGGTCACC GGGCAGTCCT ACGAGCGGGC TGTCGCCGAG
CTCGTCCTCA CCCCGCTGGG CCTGATTGAC ACCGTCTTCG ACCTCGACGA CGTGATGGTC
CGCACGTTCG CGGTCGGCCA CAACCGCGAC GCCGACGGCG TCCTGCACGC CGCCACGCCG
TGGAAGTCCT ACCCGGCCGG CACGCACGGC AACAACCCCG GCGGAGGCGG CGTCTCCTGC
GCCGCGGACC TGCTGCGCTG GGCCCGTTTC CACCTCGGGG AGCAGGTCGG CGCCGCCGAG
CAGGTGCTGT CGGTCGAGGC GCGCCGCGCG ATGCGGGAGC CGAAGTCCGA ACTGCGCGGC
TCCACGCTCG GCGACGCGTT CGGCTTCGGC TGGTTCCTCA ACGAGATCGG CGGCGTGCGC
ACCTTCGGCC ACGGCGGCAG CGGCAACGGC CAGTTCGCCG AACTGCTCGC GGTCCCCGAG
CGCGGCTTCG CGATCGCGGT GCTGAGCAAC GCGACCGAGG GCTACCAGCT GAATCAGGAC
ATTGTGAAGT GGGCGCTGGA GCACTTCCTC GCGGTGGTCG AGCAGGACCC GGAGCCGGTG
GCTTATGACG CCGACCGCAA CCGCGCCGTG GTCGGCCGCT ACGAGATCGA CGCGATGAAC
CTCGACATCG CCGACGACGG CGAGCACCTG ACCCTCGCGG TCGGCATCAA GCCGGAGATC
CGCGCCGCCT CCGACGCCGA CATGCCGCCG GACTATCCCG CCGCCGCCAT GGGTTTCCTC
GCCGCGGACG GCGACGACTA CATCATCACC GAGGGCGGGC TGAAGGGGCA GCGCGGGGTG
TTCGCCCGGG ACGAGAGCGG CGCGATCGTC GGGATCGACA TCGCGGGGCG GTTGTTCGGG
CGCGCCGGCT GA
|
|---|
| Protein sequence | MASQGTAQEL AAFVAEAAKA YDVPGVSVGV LLDGREYFTS VDVDERTLFH IASVTKSFTA
TALMRLAAEG RIDLEAPVRT YVPELKLADE THAARITVRN LLDHTGGLEW NLIDTGSGTG
TDSGTADGDG SLAAFVAKLV ALPLIAEPGV RASYSQAGYN LLGRVIEKVT GQSYERAVAE
LVLTPLGLID TVFDLDDVMV RTFAVGHNRD ADGVLHAATP WKSYPAGTHG NNPGGGGVSC
AADLLRWARF HLGEQVGAAE QVLSVEARRA MREPKSELRG STLGDAFGFG WFLNEIGGVR
TFGHGGSGNG QFAELLAVPE RGFAIAVLSN ATEGYQLNQD IVKWALEHFL AVVEQDPEPV
AYDADRNRAV VGRYEIDAMN LDIADDGEHL TLAVGIKPEI RAASDADMPP DYPAAAMGFL
AADGDDYIIT EGGLKGQRGV FARDESGAIV GIDIAGRLFG RAG
|
|---|
| |