Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1708 |
Symbol | |
ID | 8333051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1935627 |
End bp | 1936139 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954858 |
Product | NUDIX hydrolase |
Protein accession | YP_003112470 |
Protein GI | 256390906 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCCG ACGAAGAACT CGTCTACGAG GTCGACGAGA ACGACCGGAT CCTGCGGATC GTGCGCCGTG GCGAACTCAC CGACAAGAGC CTGCGGCACC GCAGTGTCGA CATCCTGTTC CGCGACAGCG CGGGGCGGAT CCTGGTGCAC CGGCGCGCCG CGGTGAAGCG CGTCTTTCCG CAGTACTACG ACATGTTCGT GGCCGGCATG GTCCCGGCCG GCGAGTCCTA CGACCAGGCC GCGCGCCGGG AGGCCGCCGA GGAGGTCGGG CAGCGCAACG TCGTGCTGCG GCCGGTCGGC AGGTGGCGTT TCGACGACGC CGAGGTGCCG CAGTGGGGCT CGGTCTACAC CGCGACCGTC ACCGGCCCGG TGGTCCCGCA GCCCGAGGAG GTCGAGTGGT TCGGCTTCCT CACCGAGGCG GAGCTGGCCG AGAAGATCGA GCAGGACGAC TTCTGCCCGG ACAGCCTGTT TTTCTATCGC CAGTACCGCA AGCTGCGCGG CTACGCGGTG TGA
|
Protein sequence | MNPDEELVYE VDENDRILRI VRRGELTDKS LRHRSVDILF RDSAGRILVH RRAAVKRVFP QYYDMFVAGM VPAGESYDQA ARREAAEEVG QRNVVLRPVG RWRFDDAEVP QWGSVYTATV TGPVVPQPEE VEWFGFLTEA ELAEKIEQDD FCPDSLFFYR QYRKLRGYAV
|
| |