Gene Caci_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1708 
Symbol 
ID8333051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1935627 
End bp1936139 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content69% 
IMG OID644954858 
ProductNUDIX hydrolase 
Protein accessionYP_003112470 
Protein GI256390906 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG ACGAAGAACT CGTCTACGAG GTCGACGAGA ACGACCGGAT CCTGCGGATC 
GTGCGCCGTG GCGAACTCAC CGACAAGAGC CTGCGGCACC GCAGTGTCGA CATCCTGTTC
CGCGACAGCG CGGGGCGGAT CCTGGTGCAC CGGCGCGCCG CGGTGAAGCG CGTCTTTCCG
CAGTACTACG ACATGTTCGT GGCCGGCATG GTCCCGGCCG GCGAGTCCTA CGACCAGGCC
GCGCGCCGGG AGGCCGCCGA GGAGGTCGGG CAGCGCAACG TCGTGCTGCG GCCGGTCGGC
AGGTGGCGTT TCGACGACGC CGAGGTGCCG CAGTGGGGCT CGGTCTACAC CGCGACCGTC
ACCGGCCCGG TGGTCCCGCA GCCCGAGGAG GTCGAGTGGT TCGGCTTCCT CACCGAGGCG
GAGCTGGCCG AGAAGATCGA GCAGGACGAC TTCTGCCCGG ACAGCCTGTT TTTCTATCGC
CAGTACCGCA AGCTGCGCGG CTACGCGGTG TGA
 
Protein sequence
MNPDEELVYE VDENDRILRI VRRGELTDKS LRHRSVDILF RDSAGRILVH RRAAVKRVFP 
QYYDMFVAGM VPAGESYDQA ARREAAEEVG QRNVVLRPVG RWRFDDAEVP QWGSVYTATV
TGPVVPQPEE VEWFGFLTEA ELAEKIEQDD FCPDSLFFYR QYRKLRGYAV