Gene Caci_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1700 
Symbol 
ID8333043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1929853 
End bp1931190 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content68% 
IMG OID644954850 
Productglutamine synthetase, type I 
Protein accessionYP_003112462 
Protein GI256390898 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC AGCAGGAGTT CGTACTCCGC ACCCTCGAAG AGCGGGACAT CCGCTTCGTG 
CGTCTCTGGT TCACCGACGT CCTGGGCTTC CTGAAATCGG TGGCGATCGC CCCGGCGGAG
CTGGAACAGG CGTTCAGCGA GGGCATCGGC TTCGACGGCT CGTCGATCGA GGGCTTCGCC
CGGGTGGCCG AGTCGGACAT GCTGGCCAAG CCCGACCCCG CGACGTTCCA GATCCTGCCC
TGGCGCGCGG AGTCCCCGGG CACGGCGCGC ATGTTCTGCG ACATCCTGAT GCCCGACGGC
GCCCCCAGCT ACGCGGACCC CCGCTGGGTG CTCAAGCGCA CCCTGGCCAA GGCCGCCGAG
CGCGGGTTCA CGTTCTACAC GCACCCCGAG ATCGAGTTCT ACCTGTTCGA GGGCCAGCCC
AAGCCGGGCA AGGCACCGGA GCCGGTGGAC CATTCGGGGT ACTTCGACCT CACCCCGCAC
GGCGTCGGCC ACGACTTCCG CCGCCAGGCC ATCACCCACC TGGAGTCGAT GGGCATCTCG
GTGGAGTTCA GCCACCACGA GGGCGGCCCG GGCCAGCAGG AGATCGACCT GCGCTACGCC
GACGCGCTGT CCACCGCGGA CAACATCATG ACCTTCCGCC ACGTCATGAA GGAGGTGGCG
CTCGAGCAGG ACGTCTACGC CTCCTTCATG CCCAAGCCGC TGGCCGAGCA CCCCGGCAGC
GGCATGCACA CCCACCTGTC GCTGTTCGAG GGCGACCGCA ACGCCTTCCA CGAACCCGGC
GCGGAGTACA GCCTGTCCAA GACCGGCCGC AGCTTCATCG CCGGCCTCCT GCACCACGCC
AGCGAGTTCA CCGCCGTCAC CAACCAGTTC GTGAACAGCT ACAAGCGCCT CTTCAGCGGC
GGCGAGGCGC CCAGCTACAT CAGCTGGGGC CACAACAACC GCTCGGCCCT GGTCCGCGTC
CCGATGTACA AGCCCTCCAA ATCCCAGTCC AGCCGCGTCG AAGTCCGCTC CCTGGACTCG
GCCTGCAACC CCTACCTCGC CTTCGCCGTG ATGCTGGCCG CAGGCCTGAA GGGCGTCGAG
GAAGGCTACG AACTCCCCGC CGGCGCCGAG GACAACATCT GGACCCTGAC CGACGGCGAA
CGCCGCGCCC TGGGCATCGA GACCCTGCCC TCCTCGCTGT CGGAGGCCAT CTCCCGCATG
GAGGAAAGCG AGCTGGTCGC CGAGACCCTC GGCGAGCACG TCTTCGACTT CTTCCTGCGA
AACAAGCGCG CCGAATGGCT GGACTACCGG CACCAGGTGA CGCCGTTCGA GCTGAACCGG
TACCTGCCGG TGCTGTAG
 
Protein sequence
MERQQEFVLR TLEERDIRFV RLWFTDVLGF LKSVAIAPAE LEQAFSEGIG FDGSSIEGFA 
RVAESDMLAK PDPATFQILP WRAESPGTAR MFCDILMPDG APSYADPRWV LKRTLAKAAE
RGFTFYTHPE IEFYLFEGQP KPGKAPEPVD HSGYFDLTPH GVGHDFRRQA ITHLESMGIS
VEFSHHEGGP GQQEIDLRYA DALSTADNIM TFRHVMKEVA LEQDVYASFM PKPLAEHPGS
GMHTHLSLFE GDRNAFHEPG AEYSLSKTGR SFIAGLLHHA SEFTAVTNQF VNSYKRLFSG
GEAPSYISWG HNNRSALVRV PMYKPSKSQS SRVEVRSLDS ACNPYLAFAV MLAAGLKGVE
EGYELPAGAE DNIWTLTDGE RRALGIETLP SSLSEAISRM EESELVAETL GEHVFDFFLR
NKRAEWLDYR HQVTPFELNR YLPVL