Gene Caci_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1697 
Symbol 
ID8333040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp1926416 
End bp1927108 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID644954847 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003112459 
Protein GI256390895 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATG ACGGCCCGCG CCCCGGCGAG CGCCATCCCG GGCACGTGCA GGGCTCCTGC 
GCCGACCCGG GCTGCGCGGC CGCCGCCGAG GGCGCCGCCC GCCGCCGGCC CGGCCGGCCG 
CGCAGCGAGG CCGCCGAACG CGCCATCCTC GAGGCGGTGC TGGGCCTGCT CAGCGAGGGC 
GTGCCCTACG GCTCGCTGTC CATGGAGCAG GTCGCGACCC GCGCCGGGGT CGGCAAGGCG 
ACCGTCTACC GGCGCTGGCC GAACAAGGAG AGCCTGGTCG TCGACTCGAT GGCCACGCTG 
TGGCAGGAGT GCCCGCCGCC GGACCTGACC GACGAGCGCA CCACCCGCGA ACGCATCGTG 
GAGTACCTGA ACACCATGGT CGGCCTCATG CACGAGGACA TGGCCGGGCT GGTGTTCGCC 
TCGGTGATGG CCGCCGCGAC GCTGCACCCG GAGCTGGTGC GGCAGTACCA GGCGGTCGCG 
ATCGAACCGC GGCGCGAGCA GCTGCGGATG ATCCTGCGGC ACGGGATCGC CGGCGGCGAG 
CTGCGCGCCG ACCTGGACGT GGAGCTCGCG GTGCGGATGT TCGCCGGGCC GATCGTGCAG 
ACGATGAAGT CCGAGCACCC GGGCAAGCCG GTGAGCGAGG AGTTCGTCGA GGCGCTGGTC 
GACACCCTGC TGGAGGGCAT CGGGCCGCGC TGA
 
Protein sequence
MIHDGPRPGE RHPGHVQGSC ADPGCAAAAE GAARRRPGRP RSEAAERAIL EAVLGLLSEG 
VPYGSLSMEQ VATRAGVGKA TVYRRWPNKE SLVVDSMATL WQECPPPDLT DERTTRERIV 
EYLNTMVGLM HEDMAGLVFA SVMAAATLHP ELVRQYQAVA IEPRREQLRM ILRHGIAGGE 
LRADLDVELA VRMFAGPIVQ TMKSEHPGKP VSEEFVEALV DTLLEGIGPR