| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1696 |
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| Symbol | |
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| ID | 8333039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1924562 |
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| End bp | 1926166 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954846 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003112458 |
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| Protein GI | 256390894 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.218803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGG AGACCCTGCA GAGGCGCCGG TGGGCGATTC TCGGTGTACT CGTCTTCAGC
TTGCTCGTGG TCGTCCTGGA CAACACGATC CTGAACGTCG CGCTCAAGAT CATCTCGCAG
CCCGAGAACG ATCCGCACCA GCCCGGTCTG GGTGCCTCCC AGTCTGATCT GGAGTGGGCG
ATCAACTCCT ACACGCTGGT GTTCGCCGGC CTGCTGTTCA CCTTCGGGAT CGTCGGCGAC
CGGTTCGGGC GCAAGAAGAT CCTGATGGCC GGCATGGTCG GGTTCGGGAT CGCCTCGGTG
CTGTGCGCCT ATGCCGGCAG TCCCGGCGCG CTGATCGCCA CCCGGGCCGT GATGGGCTTC
TTCGGCGCCG CGATCATGCC CGCCACGCTG GCCATCATCG CCAACGTCTT CGAGCCCAAG
GAGCAGCCCA AGGCGATCGG CATCTGGGCC GGCGGCGTGG GGCTGGGCGT GGCCATCGGC
CCGGTGCTCG GCGGTCTGCT GCTGGACCAC TTCTGGTGGG GCTCGGTCTT CCTGATCAAC
GTGCCGATCA TCGTCGTCGC GCTGATCGCC ATGGCGATCC TGGTGCCGGA CTCCAAGAAC
CCCAAGCCGG GCAAGCTGGA CCCGCTGGGC GTGTTCCTGT CGATGGCCGG GATCGTCGTG
TTCGTCTACG GCATCATCCG CGGCGCCGAC GTCGGCTGGG GCAACCCGCA GATCTGGGGC
TCGCTGGCCG CCGGCATCCT GCTGTCCGCC GGGTTCGTGT TCTGGGAACT GCGGACCGAC
CACCCCGCGC TGGACGTGCG GCTGTTCCGC AGCTCGCGGC CCTTCTCGGC CTCGGTCATG
CTGGTCGGCC TGTCCTTCTT CGCGATGATG GGCGTGCTGT TCTTCCTGTC CTTCTACCTG
CAGTCGGTGC TGAACTACAG CCCGCTGAAG GCCGGTCTGT TCCTGACGCC GTTCGCGCTG
GCGCAGCTGA TCTTCTCGCC GCTGTCGGCG CGGCTGGTGC AGCGCTTCGG GGCGCGCGCG
GTGTCCACCT TCGGCATGGT GGTCATCGGT GTCACGTTCC TGATGTACCA GTTCGTGAAC
CAGACCTCGG CGGCCTGGCT GCTGCTGCTG ATCTTCTTCC TGCAGGGCAT GGGCATGGCG
AACGTGATGC CGCCGGCGAC CACGACGATC ATGACCTCGC TGCCCCGGGA GAAGGCCGGC
GTCGGCTCCT CGGTGAGCAA CACCGTCCGG CAGGTCGGCG GCGCGCTGGG CGTCGCGGTG
CTGGGCACGC TGCTCACCAC GGCCTACCGC GGCCGGATGG AGGCTCCGCT CAGGACGGTC
GTGCCGAACC CCTCGGCGCT GCACGACATC GACGGCTCGA TCCAGGCCAC CAAGGGCGCC
GGCGAGCACG TCCCGGTGCT GGCGCACTTC TACCCGCAGG CCGACGCCGC GTTCATCCAC
GCGATGCACG TGACCGTGAC GGTCTCGGCG ATCGTCGCCT TCCTCGCCGC GATCGTGTCG
CTGACCTGGC TGCCGCGAAA GTCCGCCGGC GCACCGGCCG GACCGCCGCA GCGACAGGCC
GGCGCTGACG CCTCGGCCGC GGCCGAAGCC GCCGGAGTGG CCTGA
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| Protein sequence | MDRETLQRRR WAILGVLVFS LLVVVLDNTI LNVALKIISQ PENDPHQPGL GASQSDLEWA
INSYTLVFAG LLFTFGIVGD RFGRKKILMA GMVGFGIASV LCAYAGSPGA LIATRAVMGF
FGAAIMPATL AIIANVFEPK EQPKAIGIWA GGVGLGVAIG PVLGGLLLDH FWWGSVFLIN
VPIIVVALIA MAILVPDSKN PKPGKLDPLG VFLSMAGIVV FVYGIIRGAD VGWGNPQIWG
SLAAGILLSA GFVFWELRTD HPALDVRLFR SSRPFSASVM LVGLSFFAMM GVLFFLSFYL
QSVLNYSPLK AGLFLTPFAL AQLIFSPLSA RLVQRFGARA VSTFGMVVIG VTFLMYQFVN
QTSAAWLLLL IFFLQGMGMA NVMPPATTTI MTSLPREKAG VGSSVSNTVR QVGGALGVAV
LGTLLTTAYR GRMEAPLRTV VPNPSALHDI DGSIQATKGA GEHVPVLAHF YPQADAAFIH
AMHVTVTVSA IVAFLAAIVS LTWLPRKSAG APAGPPQRQA GADASAAAEA AGVA
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