Gene Caci_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1690 
Symbol 
ID8333033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1918261 
End bp1919118 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID644954840 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003112452 
Protein GI256390888 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.967084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAC TTGTACCCGG CACCGTCTCT CCCACTCTGC CCGTCCCGGC GGCGATCAAG 
CGACCGGAGT ACGTGGGACG CAAGGGACCC AGGCCGTACA CCGGCGGCGA GGTCCAGGAC
GCCGAGACCG TCGAGAAGAT GCGGACCGCC TCCCGCATCG CCGCCGACGC GCTGGTGGAG
ACCGGCAGGG CGGCCAAGCC CGGCGTCACC ACCGACGAGC TGGACCGCAT CGGCCACGAG
TACCTGCTGG ACCACCGCGC CTACCCCTCC ACGCTGGGCT ACAAGGGGTA CCCCAAATCG
ATGTGCACCT CGGTCAACGA GGTCATCTGC CACGGCATCC CGGACACCAC GGTCCTGGCG
GACGGCGACA TCGTGAACGT GGACATCACC GCCTACATCG GCGGCGTCCA CGGCGACACC
AACGCCACCT TCGAGGTCGG CACCGTAGAC GAGGAATCGC ACCTGCTGGT CGAGCGCACC
CGCGAAGCCC TGGACCGCGC CATCAAGGCC GTCCGCCCCG GCCGCCAGAT CAACGTCATC
GGCCGCGTGA TCGAGAGCTA CGCCAAGCGC TTCGGCTACG GCGTCGTCCG CGACTTCACC
GGCCACGGCA TCTCCACGGC CTTCCACACC GGCCTGATCA TCCCGCACTT CGACGACCCC
TACGCGACCC TGGTGATGCA GCCCGGCATG ACCTTCACCA TCGAGCCCAT GCTCACCCTC
GGCACCGCCG ACTACGAGAT GTGGCCCGAC AAGTGGACCG CGGTCACCCG CGACCGCAAG
CGCACCGCCC AGTTCGAGCA CACGATGGTC GTGACGAACG ACGGCGTCGA GGTGCTGACG
CTGCCCAGCG GGGAGTGA
 
Protein sequence
MATLVPGTVS PTLPVPAAIK RPEYVGRKGP RPYTGGEVQD AETVEKMRTA SRIAADALVE 
TGRAAKPGVT TDELDRIGHE YLLDHRAYPS TLGYKGYPKS MCTSVNEVIC HGIPDTTVLA
DGDIVNVDIT AYIGGVHGDT NATFEVGTVD EESHLLVERT REALDRAIKA VRPGRQINVI
GRVIESYAKR FGYGVVRDFT GHGISTAFHT GLIIPHFDDP YATLVMQPGM TFTIEPMLTL
GTADYEMWPD KWTAVTRDRK RTAQFEHTMV VTNDGVEVLT LPSGE