Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1689 |
Symbol | |
ID | 8333032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1917375 |
End bp | 1918214 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954839 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_003112451 |
Protein GI | 256390887 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGTGA CCACACCGCC GCCCCGGATA CCGACCGTCC CCGCCGACCG CCGCATCCCG CTGGCCGGCA CCTTCAACCT CCGCGACGTC GGCGGCTACC CGGCCGCCGG CGGCACCGTC CGCGCGGGCC TCCTGCTCCG CGGCGACGCC CTGCACCGCC TCGACGACAG CGCCCGCGCC ACCCTGGCCG GCCTCCCCGT CCGCACCGTG GTGGACCTGC GTGAAGACTT CGAAGCCCGG CTGTCACCCG ACGCCCTCGA CGGCACCGGC ATCGCGGTCC TGCGCCTCCC GGTCTTCCGC TTCACCGGCG ACTCCTTCGG CAAGTCCCCC GAGGACCTCA AGACGGTCTA CGACCACATG GTCGACGACT GCGGCGAGGT CCTCGCAGCC GCCGTGGCCC ATGTGGCAAC CGCCACAGCC CACCCGATCC TGGTCCACTG CTCCGCGGGC AAGGACCGCA CCGGCGTCGT GGTCGCCATC ATCCTGTCGC TCCTCGGCGT CAGCGACGAG GTCATAGCCG AGGACTACCA CCTCACCAGC GCCTACCTCG CCGAGGAGTT CACCCAGGCG GTCGAGCAAC TGCAAGCCGC CACCGGCCTC GGCCAACGGC TGAACGGCCA AGCCCTGGCC TGCCCGCCGG AGCTGATCCT GGCGACCCTG GAGCGCATGC GCGCCTCGCA CGGCTCGATC GAGGGCTACT TGCTGGCGCA CGGGCTGACC GCGCAGCTGG TCGCCGAGCT TCGCAGGAGC CTGATAGAGC CGCTGGTGGT GGAGGCGGTT GTCGAGGCAG CCGTGGTCGA GGCGGTCGCG GCGGAGACCG CTGGCGAGCC GACCGACTGA
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Protein sequence | MAVTTPPPRI PTVPADRRIP LAGTFNLRDV GGYPAAGGTV RAGLLLRGDA LHRLDDSARA TLAGLPVRTV VDLREDFEAR LSPDALDGTG IAVLRLPVFR FTGDSFGKSP EDLKTVYDHM VDDCGEVLAA AVAHVATATA HPILVHCSAG KDRTGVVVAI ILSLLGVSDE VIAEDYHLTS AYLAEEFTQA VEQLQAATGL GQRLNGQALA CPPELILATL ERMRASHGSI EGYLLAHGLT AQLVAELRRS LIEPLVVEAV VEAAVVEAVA AETAGEPTD
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