Gene Caci_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1689 
Symbol 
ID8333032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1917375 
End bp1918214 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID644954839 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003112451 
Protein GI256390887 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGA CCACACCGCC GCCCCGGATA CCGACCGTCC CCGCCGACCG CCGCATCCCG 
CTGGCCGGCA CCTTCAACCT CCGCGACGTC GGCGGCTACC CGGCCGCCGG CGGCACCGTC
CGCGCGGGCC TCCTGCTCCG CGGCGACGCC CTGCACCGCC TCGACGACAG CGCCCGCGCC
ACCCTGGCCG GCCTCCCCGT CCGCACCGTG GTGGACCTGC GTGAAGACTT CGAAGCCCGG
CTGTCACCCG ACGCCCTCGA CGGCACCGGC ATCGCGGTCC TGCGCCTCCC GGTCTTCCGC
TTCACCGGCG ACTCCTTCGG CAAGTCCCCC GAGGACCTCA AGACGGTCTA CGACCACATG
GTCGACGACT GCGGCGAGGT CCTCGCAGCC GCCGTGGCCC ATGTGGCAAC CGCCACAGCC
CACCCGATCC TGGTCCACTG CTCCGCGGGC AAGGACCGCA CCGGCGTCGT GGTCGCCATC
ATCCTGTCGC TCCTCGGCGT CAGCGACGAG GTCATAGCCG AGGACTACCA CCTCACCAGC
GCCTACCTCG CCGAGGAGTT CACCCAGGCG GTCGAGCAAC TGCAAGCCGC CACCGGCCTC
GGCCAACGGC TGAACGGCCA AGCCCTGGCC TGCCCGCCGG AGCTGATCCT GGCGACCCTG
GAGCGCATGC GCGCCTCGCA CGGCTCGATC GAGGGCTACT TGCTGGCGCA CGGGCTGACC
GCGCAGCTGG TCGCCGAGCT TCGCAGGAGC CTGATAGAGC CGCTGGTGGT GGAGGCGGTT
GTCGAGGCAG CCGTGGTCGA GGCGGTCGCG GCGGAGACCG CTGGCGAGCC GACCGACTGA
 
Protein sequence
MAVTTPPPRI PTVPADRRIP LAGTFNLRDV GGYPAAGGTV RAGLLLRGDA LHRLDDSARA 
TLAGLPVRTV VDLREDFEAR LSPDALDGTG IAVLRLPVFR FTGDSFGKSP EDLKTVYDHM
VDDCGEVLAA AVAHVATATA HPILVHCSAG KDRTGVVVAI ILSLLGVSDE VIAEDYHLTS
AYLAEEFTQA VEQLQAATGL GQRLNGQALA CPPELILATL ERMRASHGSI EGYLLAHGLT
AQLVAELRRS LIEPLVVEAV VEAAVVEAVA AETAGEPTD