Gene Caci_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1687 
Symbol 
ID8333030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1915819 
End bp1916523 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID644954837 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003112449 
Protein GI256390885 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA CCAGAAACCT CGCCTGGGAC GGCTGCGTCA ACGTCCGAGA CCTCGGCGGA 
CTCGGACGGA TCAAGCCGGG CGCGGTGGTC CGGATGGAAG CCCCGACCAG CCTGACGGCG
GCGGGCTGGA CCGCGGCCTG GGACCACGGC GTCCGCACGG TGCTGGACCT GCGCGCCGAG
GACGAATCCG AGGCGGATCA GACGCCGAGA CCGGACGGCA TCGCCGCGGT CCGCGTCCCC
CTGGACCCCG AGCCCGGCAC GGCGTTCCAC GACCACTGGA CGCCGATCGA CAACATGGCG
ACGCCCCTGT ACCTCCCGGC ACTCCTGGCC GAGTACCCGG ACCGCGTGGT CGCCGCGGTC
CGGGCCATCG CGACCGCGGC GCCCGGCTGC GTGGTCTTCC ACTGCTCCGG CGGCAAGGAC
CGCTCCGGCC TGATCGCCTT GGTCCTGCTC GCCTTCGCCG GCGCCGAGCC GGAGGAGATC
GTCGCCGACT ACCTGCTCAC CTTCGACCGG ATGAAGGCGC GGTACGACGC GCTGGGCATC
CGCGACCAAC GCGTCGCGGT CGGCGAGCGC CTCGCCCAGC ACGGCACCAC CATCGAGGCG
TCGCTGAGCA CGACGATCGC CGGGCTGACG ATGCCCGGCT ACTTGCTGGA CAACGGCTTG
TCCGCGGCGG ATCTGAGCGC CCTGGAGTCC CGCCTCAGCG CGTGA
 
Protein sequence
MIATRNLAWD GCVNVRDLGG LGRIKPGAVV RMEAPTSLTA AGWTAAWDHG VRTVLDLRAE 
DESEADQTPR PDGIAAVRVP LDPEPGTAFH DHWTPIDNMA TPLYLPALLA EYPDRVVAAV
RAIATAAPGC VVFHCSGGKD RSGLIALVLL AFAGAEPEEI VADYLLTFDR MKARYDALGI
RDQRVAVGER LAQHGTTIEA SLSTTIAGLT MPGYLLDNGL SAADLSALES RLSA