Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1687 |
Symbol | |
ID | 8333030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1915819 |
End bp | 1916523 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954837 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_003112449 |
Protein GI | 256390885 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCA CCAGAAACCT CGCCTGGGAC GGCTGCGTCA ACGTCCGAGA CCTCGGCGGA CTCGGACGGA TCAAGCCGGG CGCGGTGGTC CGGATGGAAG CCCCGACCAG CCTGACGGCG GCGGGCTGGA CCGCGGCCTG GGACCACGGC GTCCGCACGG TGCTGGACCT GCGCGCCGAG GACGAATCCG AGGCGGATCA GACGCCGAGA CCGGACGGCA TCGCCGCGGT CCGCGTCCCC CTGGACCCCG AGCCCGGCAC GGCGTTCCAC GACCACTGGA CGCCGATCGA CAACATGGCG ACGCCCCTGT ACCTCCCGGC ACTCCTGGCC GAGTACCCGG ACCGCGTGGT CGCCGCGGTC CGGGCCATCG CGACCGCGGC GCCCGGCTGC GTGGTCTTCC ACTGCTCCGG CGGCAAGGAC CGCTCCGGCC TGATCGCCTT GGTCCTGCTC GCCTTCGCCG GCGCCGAGCC GGAGGAGATC GTCGCCGACT ACCTGCTCAC CTTCGACCGG ATGAAGGCGC GGTACGACGC GCTGGGCATC CGCGACCAAC GCGTCGCGGT CGGCGAGCGC CTCGCCCAGC ACGGCACCAC CATCGAGGCG TCGCTGAGCA CGACGATCGC CGGGCTGACG ATGCCCGGCT ACTTGCTGGA CAACGGCTTG TCCGCGGCGG ATCTGAGCGC CCTGGAGTCC CGCCTCAGCG CGTGA
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Protein sequence | MIATRNLAWD GCVNVRDLGG LGRIKPGAVV RMEAPTSLTA AGWTAAWDHG VRTVLDLRAE DESEADQTPR PDGIAAVRVP LDPEPGTAFH DHWTPIDNMA TPLYLPALLA EYPDRVVAAV RAIATAAPGC VVFHCSGGKD RSGLIALVLL AFAGAEPEEI VADYLLTFDR MKARYDALGI RDQRVAVGER LAQHGTTIEA SLSTTIAGLT MPGYLLDNGL SAADLSALES RLSA
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