Gene Caci_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1672 
Symbol 
ID8333015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1898802 
End bp1899524 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID644954822 
Productprotein of unknown function DUF820 
Protein accessionYP_003112434 
Protein GI256390870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.158982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTAG CCATGAACGA TGAAGCACCG CCTTCTCCAC CGGCCGCCGA GCTGGAGGCG 
TCGCCGGAGC TCTGGTCCGC GTTTGCTCTG GTGGAGTGGG CCGGTCTGCT CGACGGTGTC
ACTTTTGAGA TGTGGAAACA CATCCCCGAA GAGGTCTGCC GGGACCACGA GCTCGACAAC
GGCCGCCTGA TCCGCCGCCA GTCGGGCAGC CCCGGCCACC AGTACTTGTC GCTCCAATTG
GCGATGGCGC TTCAGACAGC GGCCAAACGA GCGGTTCAGG AGGGCGCTTT TCCCTGCCTG
AAAGTGGCTC AGGATCTCGA CACCCGGCTG TGGGAGGTCC CGAAGTCGAC GGTCCGCAGA
CCTGACGTCC TGGTCCACCG TTGCCTGGAG GAATCCGACG AGGACTTGTG GGCGACGCAT
GTCGTGCTCG CCGTCGAGAT CGTCTCGCCG ACCAGCCGCG CGACCGACAC CGGGCAGGAC
AACCCCGATG CCGGCTTCGA ATCGAAGATG ACCCAGTACG CCCGGGCCGG GATCAAGCAC
TACTGGATCG TGCGCCTGAA GGCGGATGAC TCGGCTGTCG AGTCGATCGA GGAGTGGCGT
CTGGCGGAAC GGCTCGGCCG CTACACGCTC GTGGCGGTGT GGTCGGCCGG AGTCAGCCGT
GACGCGGTGT CCACCGAGTA CCCGTTCGGT ATCGAGATCA GCTGGTCCGA TCTCGCGTTC
TGA
 
Protein sequence
MTVAMNDEAP PSPPAAELEA SPELWSAFAL VEWAGLLDGV TFEMWKHIPE EVCRDHELDN 
GRLIRRQSGS PGHQYLSLQL AMALQTAAKR AVQEGAFPCL KVAQDLDTRL WEVPKSTVRR
PDVLVHRCLE ESDEDLWATH VVLAVEIVSP TSRATDTGQD NPDAGFESKM TQYARAGIKH
YWIVRLKADD SAVESIEEWR LAERLGRYTL VAVWSAGVSR DAVSTEYPFG IEISWSDLAF