Gene Caci_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1667 
Symbol 
ID8333010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1893274 
End bp1894137 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID644954817 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_003112429 
Protein GI256390865 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.23675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGC TGGTCGCCCT GACCGCCACC GGCTGCGACG CAGGCCAATT CAAGCGGCTC 
GGGGTCCCCC AGCCGGCCAC CAAGGAAGCG CCGATCATCC TGCACCTGTG GCAGGGCTCG
TGGATCGCCG CGCTGGCCGT GGGTGCGCTG GTGTGGGGCC TGATCCTGTG GTGCGTCATC
TTCTACCGGC GCAAGCGCAC CGGCATCGAG ATCCCCGCTC AGACCCGCTA CAACGTCCCG
ATCGAAGTGC TGTTCACGGT CGTGCCGTTC ATCATGATCG CGGTGCTGTT CTTCTTCACG
GCCAAGGACG AGTCCAAGCT CCTGGCCCTG CACAAGAACC CCGACGTGAA GATCAACGTC
GTGGGGCGGC AGTGGTCCTG GTCCTGGAAC TACAACTACG ACGCGGTCTC CCAGCAGGAC
ACCCCCGGCC AGCTGGCGGT CTACGACGCC GGCACGCCGG CGGACCTGCC GGTGCTGTGG
CTGCCGGTGA ACGAGCGGGT CCGCTTCACG CTGACCTCCA CCGACGTCAT CCACTCCTTC
TGGGTCCCGA ACTTCCTGTT CAAGCTGGAC GTGGTCCCCG GGCGCGTCAA CGAGTTCGAA
CTCACCCCCT CCAAGGAGGG CGAGTTCATC GGCCGCTGCG CCGAGCTGTG CGGTGTCGAC
CACTCCCGGA TGCTGTTCAA GGTCAAGGTC GTCTCGGCCG CTGACTACCA GAACCACCTC
AAGGCGCTGG CGTCCAAGAT CGACCCGGTG ACCGGCAAGG GCCAGACCGG TCAGCTGCCC
GTGGGTTACA ACACCAACGG CGTCCCGCTG CGCGTCGGCC CGCTGACCGG CATCGGCAAC
GACTCCACAG GGAAAGAAAA GTGA
 
Protein sequence
MAGLVALTAT GCDAGQFKRL GVPQPATKEA PIILHLWQGS WIAALAVGAL VWGLILWCVI 
FYRRKRTGIE IPAQTRYNVP IEVLFTVVPF IMIAVLFFFT AKDESKLLAL HKNPDVKINV
VGRQWSWSWN YNYDAVSQQD TPGQLAVYDA GTPADLPVLW LPVNERVRFT LTSTDVIHSF
WVPNFLFKLD VVPGRVNEFE LTPSKEGEFI GRCAELCGVD HSRMLFKVKV VSAADYQNHL
KALASKIDPV TGKGQTGQLP VGYNTNGVPL RVGPLTGIGN DSTGKEK