Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1667 |
Symbol | |
ID | 8333010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1893274 |
End bp | 1894137 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644954817 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_003112429 |
Protein GI | 256390865 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.23675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGGC TGGTCGCCCT GACCGCCACC GGCTGCGACG CAGGCCAATT CAAGCGGCTC GGGGTCCCCC AGCCGGCCAC CAAGGAAGCG CCGATCATCC TGCACCTGTG GCAGGGCTCG TGGATCGCCG CGCTGGCCGT GGGTGCGCTG GTGTGGGGCC TGATCCTGTG GTGCGTCATC TTCTACCGGC GCAAGCGCAC CGGCATCGAG ATCCCCGCTC AGACCCGCTA CAACGTCCCG ATCGAAGTGC TGTTCACGGT CGTGCCGTTC ATCATGATCG CGGTGCTGTT CTTCTTCACG GCCAAGGACG AGTCCAAGCT CCTGGCCCTG CACAAGAACC CCGACGTGAA GATCAACGTC GTGGGGCGGC AGTGGTCCTG GTCCTGGAAC TACAACTACG ACGCGGTCTC CCAGCAGGAC ACCCCCGGCC AGCTGGCGGT CTACGACGCC GGCACGCCGG CGGACCTGCC GGTGCTGTGG CTGCCGGTGA ACGAGCGGGT CCGCTTCACG CTGACCTCCA CCGACGTCAT CCACTCCTTC TGGGTCCCGA ACTTCCTGTT CAAGCTGGAC GTGGTCCCCG GGCGCGTCAA CGAGTTCGAA CTCACCCCCT CCAAGGAGGG CGAGTTCATC GGCCGCTGCG CCGAGCTGTG CGGTGTCGAC CACTCCCGGA TGCTGTTCAA GGTCAAGGTC GTCTCGGCCG CTGACTACCA GAACCACCTC AAGGCGCTGG CGTCCAAGAT CGACCCGGTG ACCGGCAAGG GCCAGACCGG TCAGCTGCCC GTGGGTTACA ACACCAACGG CGTCCCGCTG CGCGTCGGCC CGCTGACCGG CATCGGCAAC GACTCCACAG GGAAAGAAAA GTGA
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Protein sequence | MAGLVALTAT GCDAGQFKRL GVPQPATKEA PIILHLWQGS WIAALAVGAL VWGLILWCVI FYRRKRTGIE IPAQTRYNVP IEVLFTVVPF IMIAVLFFFT AKDESKLLAL HKNPDVKINV VGRQWSWSWN YNYDAVSQQD TPGQLAVYDA GTPADLPVLW LPVNERVRFT LTSTDVIHSF WVPNFLFKLD VVPGRVNEFE LTPSKEGEFI GRCAELCGVD HSRMLFKVKV VSAADYQNHL KALASKIDPV TGKGQTGQLP VGYNTNGVPL RVGPLTGIGN DSTGKEK
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