Gene Caci_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1663 
Symbol 
ID8333006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1888856 
End bp1889851 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID644954813 
Producthypothetical protein 
Protein accessionYP_003112425 
Protein GI256390861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.158798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.107947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA GCTTTGGCAT CTATCCCGGT GGGGCGGTCG GCGGCGATCG GGGGATCGTC 
GAGCCGGTCC TCGCCGACGA CCCCGCGCTG ATCTCCCGCG CCCTCGATGA GCTGCACGGC
TCGCGCCCCG GCTTCCTCGT CCGCGCTTAC CTGCCCTTCC GTCCGCCTGC GGGCTCCGGC
GAACGGCTCG TTCCCGCCGA GCCCGAGAGG CTGCTCGGAA CAGGAACCGG CACAGGAACC
ACCCGCCGCC TCGAACTCGT CCTCGGCTTC CGCGACCCGG CTGGCGACGT CGAAAGCTGG
CTCGCCTTCG TCCGCGAAGC CATCGACACC TACGCCGAGC GCATAGCCCT CCTCCAGATC
TGCGAGGAGC CCACCGTCGA CGCGCCCTTC CTCGACGGCG CCACCCCCAA CGTCCTCAGC
GCCCTGGTCC GGGGCGTCGT CGCCGCCCGC GACCACGTCC GCGACCTGGG CCTGGCCGAC
CTCGCCGTCG GCTTCAACGC GACCCCGACC CTCGGCCCGG ACCTGTCCTT CTGGCACGAC
CTCGCCGCGG CCGCCGCCAA GGAGGCTCCG GAGTTCCATG AAGCCCTCGG CTACGTCGGC
TTCGACTTCT TCCCCGACGT CTTCCGCCCG ATCCCCGAAC CCGATCTCGC CCGCGCCGTC
GAGCTCGTCC TCACCGACCT GCGCGAGCGC GTCCTCCCGA CCGCCGGGAT CGGGCCCGAG
GTCCCCGTCC GCATCGCGGA GAACGGCTGG TCCACCGGCG CCGGACGCAC CGAGCAGCGC
CAGGCCGAGG TCCTCGAGAC CGTCCTGTCG ACGATCCTCG GCCTCCGGGA GCGCCTGAAC
ATCACCGGGT ACAGCCACTT CTGCCTGCGG GACGCCGATT CCGGCGAAGG GTCCGAGAGA
GCCTCCAACT CCCTCTATTA CGGCTTCGGG CTACTCCGTG CCGACTACAC GCCCAAACCC
GCCTTCGCCG TCTACCGCGC ACTGATGAGC CGGTGA
 
Protein sequence
MSFSFGIYPG GAVGGDRGIV EPVLADDPAL ISRALDELHG SRPGFLVRAY LPFRPPAGSG 
ERLVPAEPER LLGTGTGTGT TRRLELVLGF RDPAGDVESW LAFVREAIDT YAERIALLQI
CEEPTVDAPF LDGATPNVLS ALVRGVVAAR DHVRDLGLAD LAVGFNATPT LGPDLSFWHD
LAAAAAKEAP EFHEALGYVG FDFFPDVFRP IPEPDLARAV ELVLTDLRER VLPTAGIGPE
VPVRIAENGW STGAGRTEQR QAEVLETVLS TILGLRERLN ITGYSHFCLR DADSGEGSER
ASNSLYYGFG LLRADYTPKP AFAVYRALMS R