| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1658 |
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| Symbol | |
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| ID | 8333001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1882697 |
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| End bp | 1884283 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644954808 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003112420 |
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| Protein GI | 256390856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.274767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGCC CTCATGATCT CGGCTGGATC GCACGCACCG TGGGCGGGAC CCTGAGCGGA
CCCCCCGGCG CCACGCAGGA AGAGCTCGCA GCGCTCGCCG TCACCGGGCC CGTGGTGTTC
GACTCGCGGG ACGCCGCCGC CGGAGCGCTG TTCGTCGCGT TCCCCGGCGA AGCCGCCGAC
GGGCACGATT TCGTCCAGGC CGCCGTGGAC AAGGGCGCGG TCGCCGTGCT CGCCGCCCCG
GACGACGCCT ACCGCAAGCC GTGGACCGCC CGGGGGAGCG TCCCGACCGT CACGGTCGGC
GACGGCGACC TGCTGCGGGC CCTGTCCGCG CTGGCCACCG CGCATCTGGC GCGGCTGCCC
CGGACCACGG TCATCGGCCT GACCGGCTCG GCCGGCAAGA CCACCACCAA GGACCTGATC
GGCCGGCTGA CCCGCGAACT GGGCCCGACC GTGGCGCCGA AGGGGAGCTT CAACAACGAG
CTCGGATTCC CCATCACGGT GCTGCGGACC GATGAGGACA CCCGGTACCT GGTCGCCGAG
ATGGGCGCGC GCGGCATCGG GCACATCAAG CATCTGACGA CGATCGCCCC GCCCCGGATC
GGCGTGGTGC TGAACGTCGG CAGCGCGCAC CTCGGCGAGT TCGGCAGCGT CGAGGCCATC
GCCGAGGCGA AGGGCGAACT GGCCGCCGCG GTGCCGGAAT CCGGGAACTG CAACCCCGAC
CGCGACGGCG TCGCCATCCT CAACGCCGAC GACGCGCGGG TGCGGGGCAT GGCGGCGCGG
ACCAAGGGCC GCGTGGTGCT GTTCGGCGAG TCGCCGGACG CCGACGTGCG CGCCGAGGAC
GTCCGCGTCG GCTCGGACGG CCGGGCGAGC TTCACCCTGC TCTACCGCGA CGGCGAGGGA
CCGCACCGGT ACCCCGTCGC CTTGCGGCTG GTCGGCGAGC ACCAGGTCTC CAACGCGCTG
GCCGCCGCGG CGACCGGTCT GGAGCTGGGC CTGGCCGGGG AGAAGGTGGC CGAGGTTCTT
TCCGCCGCCG AGCCGGACAG CAAGTGGCGC ATGGCGATCG GGGAGTCCGC CGACGGCGTG
ACGGTCCTCA ACGACGCCTA CAACGCCAAC CCGGAATCGA TGCGCGCGGC GCTGAAGACG
CTGGCGACGA TGGCTCGCGC GCGCCCGGGC GCGCGCTCTT GGGCCGTCCT GGGGACGATG
GCCGAACTCG GCGACGACTC GGCGGTCGAG CACGACGCCG TGGGGCGCCT GGCGGTGCGG
TTGAACATCG CGCAGACCGT CGCGGTCGGC GCCGGCGCGG CCGCGATCCA CAGCGGCGCG
TCGATGGAAG GGTCCTACAA CGGGGAGTCG GTCGCGGTGC CCGACGCGGA CGCCGCGCTG
GCGTTCGTCC GCGCGGGGGC GCGGCCCGGG GACGTGGTGC TGGTCAAGGC CTCGCGCGCG
ATCGGGCTCG AGGCGCTGGC CGCGGCCCTG CTGGACCGCG CGGTCGACGC GCACGGGGAT
TCCGGGGATT CCGACGGGGA CTTCATTCAA GGTGCCGGGG ACGGCGACGC GCCGCAGGCG
CGCGGTGCGG GAGGTGGCGT CCGGTGA
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| Protein sequence | MTSPHDLGWI ARTVGGTLSG PPGATQEELA ALAVTGPVVF DSRDAAAGAL FVAFPGEAAD
GHDFVQAAVD KGAVAVLAAP DDAYRKPWTA RGSVPTVTVG DGDLLRALSA LATAHLARLP
RTTVIGLTGS AGKTTTKDLI GRLTRELGPT VAPKGSFNNE LGFPITVLRT DEDTRYLVAE
MGARGIGHIK HLTTIAPPRI GVVLNVGSAH LGEFGSVEAI AEAKGELAAA VPESGNCNPD
RDGVAILNAD DARVRGMAAR TKGRVVLFGE SPDADVRAED VRVGSDGRAS FTLLYRDGEG
PHRYPVALRL VGEHQVSNAL AAAATGLELG LAGEKVAEVL SAAEPDSKWR MAIGESADGV
TVLNDAYNAN PESMRAALKT LATMARARPG ARSWAVLGTM AELGDDSAVE HDAVGRLAVR
LNIAQTVAVG AGAAAIHSGA SMEGSYNGES VAVPDADAAL AFVRAGARPG DVVLVKASRA
IGLEALAAAL LDRAVDAHGD SGDSDGDFIQ GAGDGDAPQA RGAGGGVR
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